Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 RNU6-336P-201ENST00000364891 107 ntBASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 SET-203ENST00000372688 801 ntTSL 2 BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 Y_RNA.618-201ENST00000410949 107 ntBASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 RNA5SP31-201ENST00000411144 127 ntBASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 RN7SKP53-201ENST00000411337 315 ntBASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 RNU7-169P-201ENST00000459456 61 ntBASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 CYCSP39-201ENST00000565821 309 ntBASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 MIR5696-201ENST00000578474 85 ntBASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 LARP7P3-201ENST00000579888 337 ntBASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 VN1R91P-201ENST00000594377 169 ntBASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 AC009318.2-201ENST00000610917 651 ntBASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ZNRF3Q9ULT6 SRP72P2-201ENST00000344851 1979 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 U3.6-201ENST00000363622 211 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 RNU6-595P-201ENST00000363944 107 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 Y_RNA.193-201ENST00000363979 102 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 RNY3P11-201ENST00000364153 102 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 RNU1-73P-201ENST00000383971 164 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 RNU6-505P-201ENST00000384427 107 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 HMGB3P8-201ENST00000449709 577 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 MTCO3P8-201ENST00000453691 755 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 AC084357.1-201ENST00000473404 255 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 RPS4XP13-201ENST00000483219 789 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 AC131281.1-201ENST00000522984 164 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 AC040926.1-201ENST00000530195 238 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 AC110588.1-201ENST00000559699 137 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 MIR5188-201ENST00000583467 113 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 Z83843.1-201ENST00000604070 3685 ntBASIC4.23□□□□□ -1.73
ZNRF3Q9ULT6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 RNU6-527P-201ENST00000363425 104 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 SAR1AP2-201ENST00000392696 594 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 BTF3L4P2-201ENST00000392798 346 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 RPS29P13-201ENST00000402041 169 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 AC017079.2-201ENST00000416102 485 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 OR2AQ1P-201ENST00000451972 200 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 AC010655.3-201ENST00000478818 450 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 AC093852.1-201ENST00000503587 266 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 RNU6-579P-201ENST00000516879 102 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 SNORA31.18-201ENST00000517043 134 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 Y_RNA.715-201ENST00000517082 110 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 AL021879.1-201ENST00000611756 288 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 AL162274.2-201ENST00000614406 332 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 MIR4727-201ENST00000622232 55 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 AC090617.7-201ENST00000623952 126 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 ZNF72P-201ENST00000425869 1908 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZNRF3Q9ULT6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ZNRF3Q9ULT6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
ZNRF3Q9ULT6 AL356274.2-201ENST00000624379 3752 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 Y_RNA.106-201ENST00000363189 100 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 Y_RNA.123-201ENST00000363338 102 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 RNU6-884P-201ENST00000363889 107 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 RNU6-898P-201ENST00000365627 104 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 Y_RNA.556-201ENST00000384677 113 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 SNORA69.1-201ENST00000390904 137 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 MIR888-201ENST00000401186 77 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 MIR1252-201ENST00000408861 65 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 CHEK2P4-201ENST00000450340 246 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 SNRPGP5-201ENST00000456003 220 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 RPL27AP5-201ENST00000469428 449 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 FCF1P8-201ENST00000510322 597 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 AL590705.4-201ENST00000532209 134 ntBASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.21□□□□□ -1.74
ZNRF3Q9ULT6 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms