Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 RPS3AP46-201ENST00000448352 682 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 AC079354.2-201ENST00000453523 154 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 RNA5SP208-201ENST00000516156 78 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 RN7SKP209-201ENST00000516888 304 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 MYL12BP1-201ENST00000569826 507 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 U2.1-201ENST00000618978 145 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 MTND5P7-201ENST00000413558 1798 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 U3.6-201ENST00000363622 211 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-105P-201ENST00000363909 104 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 U8.11-201ENST00000384699 133 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 U8.12-201ENST00000384701 133 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 MIR518D-201ENST00000385014 87 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 RN7SKP202-201ENST00000410439 330 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-847P-201ENST00000411115 108 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 MTND3P9-201ENST00000429526 346 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 CBX3P6-201ENST00000430257 527 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 AC007389.2-201ENST00000434630 306 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 HMGB3P8-201ENST00000449709 577 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 U8.18-201ENST00000459285 133 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 SLC25A15P5-201ENST00000508033 253 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-1143P-201ENST00000516125 104 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 Y_RNA.668-201ENST00000516233 93 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 RNU1-103P-201ENST00000516502 125 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 RN7SKP83-201ENST00000516512 178 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 AL590705.4-201ENST00000532209 134 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 AC006130.2-201ENST00000586202 326 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 AC006077.1-201ENST00000604746 343 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 AC012468.1-201ENST00000604888 430 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 AC107871.2-201ENST00000612894 502 ntBASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PPARGC1AQ9UBK2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-238P-201ENST00000363313 106 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 Z98749.2-208ENST00000381646 500 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 RNU1-73P-201ENST00000383971 164 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 RPL21P1-201ENST00000399532 476 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 NDUFS5P4-201ENST00000412983 318 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 TMEM167AP1-201ENST00000423409 219 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 AC092423.1-201ENST00000430165 186 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 FCF1P4-201ENST00000448326 183 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 AC084357.1-201ENST00000473404 255 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 SNORA31.18-201ENST00000517043 134 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 AC006111.3-201ENST00000622137 383 ntBASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.84□□□□□ -1.79
PPARGC1AQ9UBK2 CUL1P1-201ENST00000509510 2425 ntBASIC3.84□□□□□ -1.8
PPARGC1AQ9UBK2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 Y_RNA.210-201ENST00000364161 110 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6-658P-201ENST00000384606 106 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 RNU6-713P-201ENST00000384761 107 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 MIR628-201ENST00000385229 95 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 BTF3L4P2-201ENST00000392798 346 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 ARF4P2-201ENST00000430209 526 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 RPS3AP12-201ENST00000443616 753 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 snoU109.2-201ENST00000459316 135 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 SNORA43.2-201ENST00000516652 128 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 AC011602.1-201ENST00000546484 331 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 H3F3AP1-201ENST00000559984 334 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 AMZ2P1-203ENST00000565833 850 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 AC104581.2-201ENST00000572227 430 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 MIR5047-201ENST00000579212 100 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 MIR1244-1-201ENST00000612829 85 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 MIR6134-201ENST00000617606 109 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 MIR8062-201ENST00000621515 85 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 MIR1244-3-201ENST00000635744 85 ntBASIC3.83□□□□□ -1.8
PPARGC1AQ9UBK2 MIR1244-2-201ENST00000636449 85 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms