Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.5□□□□□ -1.85
DDX56Q9NY93 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX56Q9NY93 AC091135.1-201ENST00000585943 307 ntBASIC3.5□□□□□ -1.85
DDX56Q9NY93 AC069200.1-201ENST00000609511 323 ntBASIC3.5□□□□□ -1.85
DDX56Q9NY93 AL591516.1-201ENST00000611326 274 ntBASIC3.5□□□□□ -1.85
DDX56Q9NY93 AL133216.2-202ENST00000634512 349 ntBASIC3.5□□□□□ -1.85
DDX56Q9NY93 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.5□□□□□ -1.85
DDX56Q9NY93 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
DDX56Q9NY93 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
DDX56Q9NY93 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
DDX56Q9NY93 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX56Q9NY93 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
DDX56Q9NY93 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
DDX56Q9NY93 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX56Q9NY93 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
DDX56Q9NY93 RNU6-212P-201ENST00000362642 104 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 RNA5SP197-201ENST00000363357 119 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 Y_RNA.301-201ENST00000364990 103 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 MIR218-1-201ENST00000384999 110 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 RNU6-1009P-201ENST00000390996 107 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX56Q9NY93 RNU6-1328P-201ENST00000410938 106 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 CYCSP48-201ENST00000417124 323 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 AC092017.2-201ENST00000427600 362 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX56Q9NY93 AC080013.2-201ENST00000460866 323 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 RPS26P21-201ENST00000475397 348 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 AC025518.1-201ENST00000479856 347 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 RNU6-612P-201ENST00000516909 102 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 RNA5SP454-201ENST00000517231 127 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 IGKV2-26-201ENST00000518305 343 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX56Q9NY93 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX56Q9NY93 AC106785.1-201ENST00000565935 262 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.49□□□□□ -1.85
DDX56Q9NY93 MIR3117-201ENST00000584034 78 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 AL356280.1-201ENST00000603614 379 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 AC019176.2-201ENST00000611579 315 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
DDX56Q9NY93 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.49□□□□□ -1.85
DDX56Q9NY93 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX56Q9NY93 RNU4-35P-201ENST00000362588 141 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 RNA5SP383-201ENST00000362934 120 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 Y_RNA.142-201ENST00000363491 102 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 SNORD56.5-201ENST00000364281 72 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 RNU6-1141P-201ENST00000364520 107 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
DDX56Q9NY93 AP000275.1-201ENST00000411943 390 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX56Q9NY93 NUP35P1-201ENST00000422734 947 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 AC092427.1-202ENST00000430569 476 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX56Q9NY93 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX56Q9NY93 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX56Q9NY93 UBBP3-201ENST00000445497 241 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 AL133547.1-201ENST00000448546 220 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
DDX56Q9NY93 PCMTD1P1-201ENST00000455560 355 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
DDX56Q9NY93 AC092185.1-201ENST00000491371 97 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 AC108043.1-201ENST00000512696 574 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 SNORA64.4-201ENST00000516632 81 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 RNU6-1088P-201ENST00000516850 104 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 RNU6-56P-201ENST00000516986 93 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 SNORA31.26-201ENST00000517250 137 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX56Q9NY93 AC104027.1-201ENST00000521887 300 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX56Q9NY93 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX56Q9NY93 AC037471.2-201ENST00000564941 598 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX56Q9NY93 AC105245.1-201ENST00000581934 244 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 AP001836.1-201ENST00000604675 523 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 AC018889.1-201ENST00000605372 397 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 AL034408.1-202ENST00000636088 415 ntBASIC3.48□□□□□ -1.85
DDX56Q9NY93 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX56Q9NY93 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
DDX56Q9NY93 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.47□□□□□ -1.85
DDX56Q9NY93 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX56Q9NY93 RNU6-227P-201ENST00000362865 103 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 RNU6-529P-201ENST00000363383 104 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
DDX56Q9NY93 SET-203ENST00000372688 801 ntTSL 2 BASIC3.47□□□□□ -1.85
DDX56Q9NY93 RNU6-790P-201ENST00000384479 105 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 RNU6-692P-201ENST00000384496 107 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 RNU6-95P-201ENST00000384697 107 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 MIR186-201ENST00000384988 86 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 MIR218-2-201ENST00000385006 110 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 FO393413.1-201ENST00000402892 195 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 AL356432.1-201ENST00000405809 419 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 RNU6-325P-201ENST00000411132 105 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX56Q9NY93 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.47□□□□□ -1.85
DDX56Q9NY93 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX56Q9NY93 RPL30P4-201ENST00000429309 333 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 AC018644.1-201ENST00000429934 551 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 CST9LP2-201ENST00000437612 320 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX56Q9NY93 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX56Q9NY93 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 293.9 ms