Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 MTCYBP40-201ENST00000509390 1135 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-91P-201ENST00000607774 107 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 AL136221.1-201ENST00000621449 509 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 AC138627.2-201ENST00000624202 601 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
SLC6A13Q9NSD5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.78□□□□□ -1.97
SLC6A13Q9NSD5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC138393.1-203ENST00000327086 343 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 RNU1-35P-201ENST00000362782 153 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-254P-201ENST00000363377 107 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-487P-201ENST00000365430 104 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 Y_RNA.414-201ENST00000384011 101 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-843P-201ENST00000384454 104 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 NDUFB4P4-201ENST00000404822 243 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 RN7SKP220-201ENST00000410611 288 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 RNA5SP344-201ENST00000411081 104 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AL117339.3-201ENST00000418733 162 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC004383.1-201ENST00000438135 289 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AL359672.1-201ENST00000442302 409 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC009296.1-201ENST00000443146 155 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC013470.1-201ENST00000453438 462 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC006445.1-201ENST00000491925 405 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC018710.1-201ENST00000506509 158 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC008885.1-201ENST00000514930 301 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 RNA5SP76-201ENST00000516277 87 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 RNU5B-3P-201ENST00000516601 115 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC025423.5-201ENST00000550230 219 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 FAM157A-202ENST00000615155 405 ntBASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC6A13Q9NSD5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 Y_RNA.72-201ENST00000362894 103 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 SNORD56.5-201ENST00000364281 72 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 SNORA68.1-201ENST00000364537 132 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 MIR450B-201ENST00000401182 78 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-1148P-201ENST00000410992 104 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 UBBP3-201ENST00000445497 241 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 Z96811.1-201ENST00000445880 108 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 AL031274.1-201ENST00000450334 232 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 AC012308.1-201ENST00000451232 178 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 AP001324.2-201ENST00000461163 319 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-377P-201ENST00000515965 102 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 SNORA31.6-201ENST00000516241 130 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 SCARNA13-201ENST00000516672 275 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 AP005597.4-201ENST00000526762 229 ntBASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC6A13Q9NSD5 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 SNORD73A-201ENST00000386062 65 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 SNORA48.2-201ENST00000390926 124 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-876P-201ENST00000391295 104 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 RPL19P1-201ENST00000411635 428 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 BMS1P22-201ENST00000414726 313 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 RPL23AP49-201ENST00000492925 468 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AC008628.2-201ENST00000502605 298 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 MTCO2P30-201ENST00000503662 364 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AC116353.2-201ENST00000505332 712 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AC010486.1-201ENST00000511793 424 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 MIR5004-201ENST00000579078 107 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AC107871.2-201ENST00000612894 502 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AC093913.1-201ENST00000614178 329 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 DUXAP9-208ENST00000622815 614 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AC009033.1-201ENST00000624279 431 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 AC099654.14-201ENST00000638599 341 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms