Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 U8.21-201ENST00000459536 136 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 RPL39P38-201ENST00000467018 153 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 AC109329.1-201ENST00000518744 317 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 MIR5696-201ENST00000578474 85 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 AP000787.2-201ENST00000604432 568 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 AC004852.3-201ENST00000614131 326 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 AC090740.1-201ENST00000623193 2262 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 LINC01355-201ENST00000566551 5444 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 MTND5P6-201ENST00000422338 1798 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 AC002546.1-201ENST00000588041 2504 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 SNORD14B-201ENST00000364533 90 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 RNU6-708P-201ENST00000384217 107 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 Y_RNA.562-201ENST00000384695 113 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 RNU6-1093P-201ENST00000391194 107 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 MIR1289-1-201ENST00000408836 144 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 FABP5P15-201ENST00000453566 214 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 MTND4LP30-201ENST00000454092 297 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 LINC01399-202ENST00000458450 244 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 RPL23AP45-201ENST00000476406 468 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 Y_RNA.673-201ENST00000516306 88 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 RN7SKP209-201ENST00000516888 304 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 AP003733.2-201ENST00000529409 171 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 AC103996.1-201ENST00000555468 102 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 BRDTP1-201ENST00000605735 677 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 MIR8076-201ENST00000611401 83 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 AP000553.6-201ENST00000641242 118 ntBASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
PDLIM7Q9NR12 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 HMGN2P8-201ENST00000391458 268 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 MTHFD2P2-201ENST00000407725 247 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 Y_RNA.592-201ENST00000410274 109 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 RNA5SP494-201ENST00000410653 129 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 Y_RNA.623-201ENST00000411128 95 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 Z85995.1-201ENST00000415547 335 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 HMGN2P7-201ENST00000456186 273 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 HMGB1P35-201ENST00000503360 598 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 SCARNA15.2-201ENST00000516409 127 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 RNU6-911P-201ENST00000516523 104 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 RNU6-1256P-201ENST00000516539 103 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 SNORA70.18-201ENST00000516696 98 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 AC006557.5-201ENST00000603126 811 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 MIR7112-201ENST00000616126 65 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 SDR42E1P4-201ENST00000620894 481 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 AC008568.2-201ENST00000623862 2313 ntBASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM7Q9NR12 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 Y_RNA.105-201ENST00000363182 111 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 Y_RNA.245-201ENST00000364493 95 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 Y_RNA.510-201ENST00000384511 114 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 Y_RNA.515-201ENST00000384535 112 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 MIR10A-201ENST00000385043 110 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 AL117339.3-201ENST00000418733 162 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 NDUFB1P2-201ENST00000449477 176 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 AL160314.1-201ENST00000490836 438 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 HMGB3P17-201ENST00000504195 649 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 AC034114.1-201ENST00000520293 285 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 AC025755.1-201ENST00000521306 278 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 AC026470.2-201ENST00000561492 181 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 AL161629.2-201ENST00000615347 275 ntBASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms