Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU6-586P-201ENST00000517265 104 ntBASIC5.95□□□□□ -1.46
RTN4Q9NQC3 RPL21P9-201ENST00000556149 474 ntBASIC5.95□□□□□ -1.46
RTN4Q9NQC3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RTN4Q9NQC3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RTN4Q9NQC3 AC092628.2-201ENST00000622492 339 ntBASIC5.95□□□□□ -1.46
RTN4Q9NQC3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.95□□□□□ -1.46
RTN4Q9NQC3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RTN4Q9NQC3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RTN4Q9NQC3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RTN4Q9NQC3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
RTN4Q9NQC3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
RTN4Q9NQC3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.94□□□□□ -1.46
RTN4Q9NQC3 RNU6-324P-201ENST00000363957 106 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 SNORA12-201ENST00000391162 147 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AL139281.1-201ENST00000422120 335 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AC104332.1-201ENST00000440471 797 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 RPS12P18-201ENST00000442381 270 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 SNORD2.1-201ENST00000458762 69 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AC010469.1-201ENST00000463864 576 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 RN7SL170P-201ENST00000487098 295 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 RNU6-615P-201ENST00000516065 106 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.94□□□□□ -1.46
RTN4Q9NQC3 CBX3P4-201ENST00000538909 354 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AC009127.3-201ENST00000570531 403 ntBASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.94□□□□□ -1.46
RTN4Q9NQC3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RTN4Q9NQC3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.94□□□□□ -1.46
RTN4Q9NQC3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RTN4Q9NQC3 AC000403.1-201ENST00000613696 3585 ntBASIC5.93□□□□□ -1.46
RTN4Q9NQC3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 SNORD87-201ENST00000364849 89 ntBASIC5.93□□□□□ -1.46
RTN4Q9NQC3 MIR551A-201ENST00000385042 96 ntBASIC5.93□□□□□ -1.46
RTN4Q9NQC3 HDGFP1-201ENST00000405943 252 ntBASIC5.93□□□□□ -1.46
RTN4Q9NQC3 U3.40-201ENST00000408706 208 ntBASIC5.93□□□□□ -1.46
RTN4Q9NQC3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 RN7SL517P-201ENST00000462240 305 ntBASIC5.93□□□□□ -1.46
RTN4Q9NQC3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 AP002392.1-201ENST00000537692 208 ntBASIC5.93□□□□□ -1.46
RTN4Q9NQC3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 AL499605.1-201ENST00000604628 403 ntBASIC5.93□□□□□ -1.46
RTN4Q9NQC3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RTN4Q9NQC3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 AC009487.4-201ENST00000624969 3585 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 RNU4-80P-201ENST00000363200 141 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 RNU6-1020P-201ENST00000363684 107 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 Y_RNA.180-201ENST00000363867 113 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 Y_RNA.217-201ENST00000364214 105 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 snoU13.20-201ENST00000459180 104 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 RNU7-120P-201ENST00000459334 63 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 Y_RNA.641-201ENST00000459414 105 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 RPS29P12-201ENST00000460178 152 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 RN7SL174P-201ENST00000475578 289 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 SNORA70.12-201ENST00000516084 153 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 AC024405.2-202ENST00000532731 184 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 AC002064.3-201ENST00000623448 346 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 MFSD8-242ENST00000641690 4199 ntBASIC5.92□□□□□ -1.46
RTN4Q9NQC3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RTN4Q9NQC3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RTN4Q9NQC3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.91□□□□□ -1.46
RTN4Q9NQC3 MIR375-201ENST00000362103 64 ntBASIC5.91□□□□□ -1.46
RTN4Q9NQC3 RNU6-1305P-201ENST00000364353 104 ntBASIC5.91□□□□□ -1.46
RTN4Q9NQC3 U1.1-201ENST00000384101 164 ntBASIC5.91□□□□□ -1.46
RTN4Q9NQC3 SNORA67.2-201ENST00000384300 149 ntBASIC5.91□□□□□ -1.46
RTN4Q9NQC3 RNA5SP504-201ENST00000410676 117 ntBASIC5.91□□□□□ -1.46
RTN4Q9NQC3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.91□□□□□ -1.46
RTN4Q9NQC3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.91□□□□□ -1.46
RTN4Q9NQC3 CYP2C59P-201ENST00000457790 269 ntBASIC5.91□□□□□ -1.46
RTN4Q9NQC3 ACA64.1-201ENST00000459171 127 ntBASIC5.91□□□□□ -1.46
RTN4Q9NQC3 RNA5SP473-201ENST00000516402 125 ntBASIC5.91□□□□□ -1.46
RTN4Q9NQC3 AC018630.3-201ENST00000542637 96 ntBASIC5.91□□□□□ -1.46
RTN4Q9NQC3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms