Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU5B-3P-201ENST00000516601 115 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 RPL7P20-201ENST00000520308 745 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 MTND1P35-201ENST00000526739 508 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AC009163.5-201ENST00000575421 637 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AC078899.3-201ENST00000599065 212 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AC010378.1-201ENST00000619270 362 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 RMST_7.1-201ENST00000621935 268 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AC138627.2-201ENST00000624202 601 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AC096644.4-201ENST00000563417 2912 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 MTND5P30-201ENST00000452896 1731 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-266P-201ENST00000364225 107 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-487P-201ENST00000365430 104 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 RNU4-20P-201ENST00000365601 151 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-877P-201ENST00000383868 107 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 Y_RNA.453-201ENST00000384223 109 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 FTH1P15-201ENST00000406984 280 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 MIR548F1-201ENST00000408667 84 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 RNA5SP118-201ENST00000410385 109 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-373P-201ENST00000411247 98 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 POLHP1-201ENST00000411806 470 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 OR9R1P-201ENST00000412200 877 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AL096701.2-201ENST00000416920 238 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 ERLEC1P1-201ENST00000433806 578 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AC009296.1-201ENST00000443146 155 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 snoU109.2-201ENST00000459316 135 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AL121769.1-201ENST00000469473 401 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 RN7SL20P-201ENST00000488827 297 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AC109479.2-201ENST00000517842 174 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AC019159.1-201ENST00000605094 187 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AL359198.2-201ENST00000611836 194 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 AL359757.2-201ENST00000624309 274 ntBASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1BQ9H9Y6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 AC138393.1-203ENST00000327086 343 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 Y_RNA.38-201ENST00000362617 102 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 Y_RNA.89-201ENST00000363031 102 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-1303P-201ENST00000364841 107 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 SNORA18.3-201ENST00000384122 132 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 MIR1277-201ENST00000408536 78 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 RNA5SP508-201ENST00000411327 119 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 SRIP2-201ENST00000428470 166 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 MICF-203ENST00000432679 129 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 RPS29P6-201ENST00000438196 145 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 EEF1B2P7-201ENST00000451177 676 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 FGF7P6-202ENST00000451282 293 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-1208P-201ENST00000459588 107 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 MED28P2-201ENST00000475771 317 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 SNORA43.2-201ENST00000516652 128 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 AC023050.3-201ENST00000541142 333 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 AC008121.1-201ENST00000603244 268 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 AL020991.1-201ENST00000612314 373 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 AC121333.1-201ENST00000567488 2709 ntBASIC2.81□□□□□ -1.96
POLR1BQ9H9Y6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 AL355596.1-201ENST00000565399 3996 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 AC073325.2-201ENST00000339545 159 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 RNU5E-7P-201ENST00000365290 117 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-843P-201ENST00000384454 104 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 MIR196B-201ENST00000384852 84 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 RNA5SP219-201ENST00000390940 113 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 SNORD115-47-201ENST00000391226 86 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 RPL21P2-201ENST00000440049 481 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 SNORA14.1-201ENST00000516113 141 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 AC078814.3-201ENST00000553036 491 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.8□□□□□ -1.96
POLR1BQ9H9Y6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms