Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC003989.2-201ENST00000440224 169 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 RPL7P12-201ENST00000446719 750 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 SNRPGP9-201ENST00000456025 225 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AL441985.1-201ENST00000457727 251 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 MTAPP1-201ENST00000489154 819 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 RPL23AP63-201ENST00000498752 471 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 SNORA31.25-201ENST00000517242 134 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 CBX3P7-201ENST00000532876 502 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AC092325.1-201ENST00000566449 554 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AC137800.2-201ENST00000574375 120 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AL670379.4-201ENST00000605279 254 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 AL139286.2-201ENST00000606838 396 ntBASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.26□□□□□ -2.05
RPAP3Q9H6T3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC008555.8-201ENST00000623602 2168 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 RNU6-486P-201ENST00000363116 107 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 RNU6-297P-201ENST00000384636 107 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 HMGB3P2-201ENST00000411913 584 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AL160275.3-201ENST00000423876 471 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC092447.3-201ENST00000426027 686 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 HMGB1P18-201ENST00000438801 619 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 MTND1P26-201ENST00000440488 538 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 GAPDHP17-201ENST00000449858 1001 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 MTCYBP1-201ENST00000454315 1119 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 MRPS17P9-201ENST00000511924 393 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC112206.3-201ENST00000514578 389 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 RNA5SP112-201ENST00000515937 99 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 Vault.3-201ENST00000516676 95 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC105245.1-201ENST00000581934 244 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 CLIC4P2-201ENST00000601934 717 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC098657.3-201ENST00000620434 263 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AC019226.2-201ENST00000625973 424 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AL157786.1-207ENST00000627771 695 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 Z75746.1-201ENST00000440243 2080 ntBASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.25□□□□□ -2.05
RPAP3Q9H6T3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 U3.4-201ENST00000363352 213 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 RNU6-61P-201ENST00000365528 109 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 RNU1-148P-201ENST00000384472 162 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 MIR578-201ENST00000384828 96 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AL049545.1-201ENST00000401856 572 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 U6atac.2-201ENST00000408644 118 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 Y_RNA.623-201ENST00000411128 95 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AL031779.1-201ENST00000415663 330 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC009961.2-201ENST00000435771 251 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC073614.1-201ENST00000438690 650 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AL033528.1-201ENST00000453780 140 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 PMCHL2-203ENST00000457791 237 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 MIR3682-201ENST00000581338 84 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC090578.1-201ENST00000604955 591 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC068276.1-201ENST00000605793 379 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC024581.2-201ENST00000619986 252 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 AC138627.2-201ENST00000624202 601 ntBASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.24□□□□□ -2.05
RPAP3Q9H6T3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 RNU6-1179P-201ENST00000384667 107 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 RNY3P10-201ENST00000384764 102 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 BX295541.1-201ENST00000417774 250 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 AL365338.1-201ENST00000422282 858 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 RPL31P35-201ENST00000431058 377 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms