Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 RN7SKP160-201ENST00000363804 340 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 RNA5SP132-201ENST00000364725 118 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 SNORA27-201ENST00000384323 126 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 MIR522-201ENST00000385071 87 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 BX510359.3-201ENST00000422168 306 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 RPS29P20-201ENST00000489592 171 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 PARP4P3-201ENST00000510265 317 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 RNU6-1291P-201ENST00000516591 104 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 IGKV2-18-201ENST00000522607 343 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 MIR1273E-201ENST00000581165 102 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 AL731532.1-201ENST00000623972 4236 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 AL442644.1-201ENST00000454390 3105 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 AL133243.3-201ENST00000617415 3004 ntBASIC6.25□□□□□ -1.41
RNF39Q9H2S5 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 AL049872.1-201ENST00000556323 322 ntBASIC6.24□□□□□ -1.41
RNF39Q9H2S5 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 AL353796.1-201ENST00000561542 3241 ntBASIC6.24□□□□□ -1.41
RNF39Q9H2S5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 AC007496.3-201ENST00000624987 3443 ntBASIC6.24□□□□□ -1.41
RNF39Q9H2S5 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF39Q9H2S5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 SNORD32B-201ENST00000364460 84 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 RNA5SP131-201ENST00000365452 119 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 RNU6-1235P-201ENST00000384559 107 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 MIR153-1-201ENST00000384914 90 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 RNU6-1319P-201ENST00000390855 104 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 RNU6-747P-201ENST00000390928 104 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 RNU6-241P-201ENST00000391148 104 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 AL161651.1-201ENST00000440882 223 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 RNU6-498P-201ENST00000459468 107 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 AC027667.1-201ENST00000545814 304 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 AC008739.2-201ENST00000597006 317 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 SNRPGP15-201ENST00000600149 222 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 MIR6826-201ENST00000617808 98 ntBASIC6.23□□□□□ -1.41
RNF39Q9H2S5 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF39Q9H2S5 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 SNORA70H-201ENST00000383910 135 ntBASIC6.22□□□□□ -1.41
RNF39Q9H2S5 RNU6-629P-201ENST00000384061 103 ntBASIC6.22□□□□□ -1.41
RNF39Q9H2S5 SNORA70J-201ENST00000384182 135 ntBASIC6.22□□□□□ -1.41
RNF39Q9H2S5 MIR143-201ENST00000385300 106 ntBASIC6.22□□□□□ -1.41
RNF39Q9H2S5 AL135938.1-201ENST00000443141 297 ntBASIC6.22□□□□□ -1.41
RNF39Q9H2S5 AC006539.1-201ENST00000481419 501 ntBASIC6.22□□□□□ -1.41
RNF39Q9H2S5 RN7SL570P-201ENST00000484405 292 ntBASIC6.22□□□□□ -1.41
RNF39Q9H2S5 AC234781.5-201ENST00000508429 271 ntBASIC6.22□□□□□ -1.41
RNF39Q9H2S5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF39Q9H2S5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.21□□□□□ -1.41
RNF39Q9H2S5 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RNF39Q9H2S5 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.21□□□□□ -1.41
RNF39Q9H2S5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RNF39Q9H2S5 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF39Q9H2S5 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
RNF39Q9H2S5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms