Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NUCKS1Q9H1E3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUCKS1Q9H1E3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.76□□□□□ -1.65
NUCKS1Q9H1E3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NUCKS1Q9H1E3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 Y_RNA.121-201ENST00000363309 113 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 RNU6-105P-201ENST00000363909 104 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 SNORA70E-201ENST00000384492 135 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 MIR3065-201ENST00000390137 79 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 SNORA40.19-201ENST00000390846 128 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 RNU6-239P-201ENST00000390990 99 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 RPS20P14-201ENST00000412545 360 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 AC093840.1-201ENST00000511599 336 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 RNU6-191P-201ENST00000516295 94 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 Y_RNA.686-201ENST00000516548 134 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 UBL5P4-201ENST00000562584 236 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 AL008718.3-201ENST00000610217 321 ntBASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
NUCKS1Q9H1E3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 AC110774.1-201ENST00000623567 2018 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 RNU4-80P-201ENST00000363200 141 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 RNU1-32P-201ENST00000363937 159 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 RNU6-1145P-201ENST00000384246 107 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 MIR129-1-201ENST00000384972 72 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 AC005042.3-201ENST00000453230 174 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 AC092798.1-201ENST00000458542 409 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 AC139453.3-201ENST00000493276 369 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 AP002001.1-203ENST00000534002 267 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 MIR4715-201ENST00000584117 79 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 MIR432-201ENST00000606207 94 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 AC068831.7-201ENST00000616954 363 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 MIR4727-201ENST00000622232 55 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 AC241585.2-209ENST00000638217 143 ntBASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.74□□□□□ -1.65
NUCKS1Q9H1E3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 RNA5SP443-201ENST00000363083 132 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 Y_RNA.245-201ENST00000364493 95 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 RNU4-17P-201ENST00000365598 141 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 HLFP1-201ENST00000402375 499 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 FAR2P2-201ENST00000413041 594 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 RPL17P36-201ENST00000420302 549 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 TBCAP1-201ENST00000436520 327 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 Z82210.1-201ENST00000440037 231 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 AL078601.1-201ENST00000444542 271 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 snoU13.1-201ENST00000459157 104 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 PDCD5P2-201ENST00000507570 312 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 RNU4-57P-201ENST00000515980 135 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 SNORA25.12-201ENST00000516202 82 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 RNU7-121P-201ENST00000516604 62 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 RNU6-572P-201ENST00000516724 80 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 RNA5SP165-201ENST00000517142 115 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 AC022441.3-201ENST00000605737 136 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 AC008873.1-201ENST00000625051 138 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 AL353743.1-202ENST00000431724 1695 ntBASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUCKS1Q9H1E3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NUCKS1Q9H1E3 AP001486.2-201ENST00000561652 5113 ntBASIC4.72□□□□□ -1.65
NUCKS1Q9H1E3 AC092593.1-201ENST00000515413 1815 ntBASIC4.72□□□□□ -1.65
NUCKS1Q9H1E3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUCKS1Q9H1E3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NUCKS1Q9H1E3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms