Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC062037.2-201ENST00000610137 73 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 MIR8076-201ENST00000611401 83 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AC004825.2-201ENST00000616634 455 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 MIR8062-201ENST00000621515 85 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 CUL1P1-201ENST00000509510 2425 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 RNU6-595P-201ENST00000363944 107 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 Y_RNA.307-201ENST00000365022 117 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 RNU5E-7P-201ENST00000365290 117 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 RNU6-658P-201ENST00000384606 106 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 EIF4EP2-201ENST00000422816 654 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 AC092423.1-201ENST00000430165 186 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 AC073910.1-201ENST00000445047 438 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 HIGD1AP2-201ENST00000446367 280 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 snoU109.2-201ENST00000459316 135 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 AK3P2-201ENST00000507976 429 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 RNU6-377P-201ENST00000515965 102 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 AP005902.1-201ENST00000521358 186 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 MIR5701-3-201ENST00000578890 82 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 MIR5701-1-201ENST00000585138 82 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 MIR7851-201ENST00000610611 160 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 MIR5701-2-201ENST00000615634 82 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 SCARNA4-202ENST00000625402 129 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 MTND5P7-201ENST00000413558 1798 ntBASIC3.47□□□□□ -1.85
NDC1Q9BTX1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NDC1Q9BTX1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NDC1Q9BTX1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.46□□□□□ -1.85
NDC1Q9BTX1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NDC1Q9BTX1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 MTND5P9-201ENST00000503854 1755 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 RNU6-428P-201ENST00000362942 107 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 RNU6-525P-201ENST00000363685 104 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 RNU6-379P-201ENST00000363813 104 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 RNU6-72P-201ENST00000384285 79 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 MIR34B-201ENST00000385076 84 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 RN7SKP58-201ENST00000411010 305 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 RPL26P27-201ENST00000414397 437 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 MTND3P9-201ENST00000429526 346 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 RPL37P4-201ENST00000448908 268 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 HMGB3P8-201ENST00000449709 577 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 AC013470.1-201ENST00000453438 462 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 RNU6-1183P-201ENST00000517054 60 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 AC144568.1-201ENST00000520139 137 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 LINC00933-203ENST00000559812 219 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 H3F3AP1-201ENST00000559984 334 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 VN1R91P-201ENST00000594377 169 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 U2.21-201ENST00000637295 81 ntBASIC3.46□□□□□ -1.86
NDC1Q9BTX1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.46□□□□□ -1.86
NDC1Q9BTX1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
NDC1Q9BTX1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.45□□□□□ -1.86
NDC1Q9BTX1 AC032011.1-201ENST00000611703 1549 ntBASIC3.45□□□□□ -1.86
NDC1Q9BTX1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.45□□□□□ -1.86
NDC1Q9BTX1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.45□□□□□ -1.86
NDC1Q9BTX1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
NDC1Q9BTX1 RNU6-874P-201ENST00000362390 105 ntBASIC3.45□□□□□ -1.86
NDC1Q9BTX1 SNORD9-201ENST00000362566 104 ntBASIC3.45□□□□□ -1.86
NDC1Q9BTX1 SNORD50.1-201ENST00000362987 71 ntBASIC3.45□□□□□ -1.86
NDC1Q9BTX1 Y_RNA.214-201ENST00000364201 112 ntBASIC3.45□□□□□ -1.86
NDC1Q9BTX1 Y_RNA.222-201ENST00000364264 102 ntBASIC3.45□□□□□ -1.86
NDC1Q9BTX1 RNU1-73P-201ENST00000383971 164 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms