Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RNU6-1329P-201ENST00000365664 107 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 HMGN2P10-201ENST00000448085 265 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 NIPA2P5-201ENST00000452282 464 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC092001.1-201ENST00000453012 261 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 RPL23AP45-201ENST00000476406 468 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC083906.5-201ENST00000503722 328 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC092436.3-201ENST00000511788 257 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 RNU6-377P-201ENST00000515965 102 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 RNU6-581P-201ENST00000516214 105 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 RNA5SP367-201ENST00000516557 118 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 SNORD59.2-201ENST00000516873 68 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 SNORA31.21-201ENST00000517180 77 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC109479.2-201ENST00000517842 174 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC010186.2-204ENST00000537668 439 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC021739.1-201ENST00000559631 174 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC100830.2-201ENST00000581636 240 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AL117336.2-201ENST00000602435 335 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 AC006023.1-201ENST00000603944 259 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 ELOCP5-201ENST00000604924 333 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 MIR6134-201ENST00000617606 109 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 ZNF519P1-201ENST00000449011 1626 ntBASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PAAF1Q9BRP4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 RNU6-527P-201ENST00000363425 104 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 RPL37P10-201ENST00000412884 288 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 SNORD56-201ENST00000413522 71 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 RPL21P40-201ENST00000428586 483 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 RPS15AP10-201ENST00000432472 382 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 RPS3AP52-201ENST00000435639 297 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 AC108938.1-201ENST00000451204 136 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 MTND4P17-201ENST00000470444 350 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 AK3P2-201ENST00000507976 429 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 Y_RNA.691-201ENST00000516611 103 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 AC069234.5-201ENST00000611056 416 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 AL359697.1-201ENST00000624879 587 ntBASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PAAF1Q9BRP4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 Y_RNA.61-201ENST00000362835 102 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 RNU6-827P-201ENST00000365553 106 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 MIR518D-201ENST00000385014 87 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 MIR767-201ENST00000390228 109 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 RNU2-49P-201ENST00000410666 184 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 RNU6-293P-201ENST00000411259 106 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AL590632.1-201ENST00000424289 371 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 RPL7P37-201ENST00000425095 738 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC105272.1-201ENST00000438604 198 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 Y_RNA.635-201ENST00000459041 101 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC018437.1-201ENST00000492214 406 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 RPL23AP49-201ENST00000492925 468 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 FGF7P4-201ENST00000509595 295 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AL355375.2-201ENST00000574825 175 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 MIR4795-201ENST00000584182 89 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AL670379.10-201ENST00000604330 253 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC113139.1-201ENST00000605049 239 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AL670379.9-201ENST00000605428 253 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AL121917.1-203ENST00000605534 577 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC064836.2-201ENST00000609491 462 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 MIR6128-201ENST00000615528 109 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC009233.1-201ENST00000616477 371 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC010378.1-201ENST00000619270 362 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC244517.12-201ENST00000623581 663 ntBASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PAAF1Q9BRP4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 AL021368.2-201ENST00000606125 5352 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 AC004944.1-201ENST00000517807 3059 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 Y_RNA.135-201ENST00000363439 95 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 RNU1-105P-201ENST00000363470 161 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 SNORA14A-201ENST00000364773 135 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 RNU6-933P-201ENST00000384424 107 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 RNA5SP354-201ENST00000391247 136 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 MIR548K-201ENST00000408406 116 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 AC006539.3-201ENST00000454258 129 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 RNU6-1037P-201ENST00000459571 107 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 RPL23AP14-201ENST00000468281 468 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 MTND5P5-201ENST00000503764 376 ntBASIC3.11□□□□□ -1.91
PAAF1Q9BRP4 AC116655.1-201ENST00000508324 901 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms