Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RN7SKP213-201ENST00000410746 298 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 Y_RNA.630-201ENST00000411370 108 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 RPL23AP27-201ENST00000415161 451 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 NDUFS5P3-201ENST00000450668 321 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 Y_RNA.651-201ENST00000459380 103 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 RN7SL727P-201ENST00000482164 296 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC091912.1-201ENST00000511351 248 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC093331.1-201ENST00000521474 169 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC024220.1-201ENST00000603675 484 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC006133.1-201ENST00000617106 264 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 MIR548AY-201ENST00000617669 107 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC008555.8-201ENST00000623602 2168 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USB1Q9BQ65 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USB1Q9BQ65 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USB1Q9BQ65 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USB1Q9BQ65 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USB1Q9BQ65 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USB1Q9BQ65 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USB1Q9BQ65 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USB1Q9BQ65 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USB1Q9BQ65 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USB1Q9BQ65 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USB1Q9BQ65 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USB1Q9BQ65 Y_RNA.35-201ENST00000362601 101 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 RNA5SP305-201ENST00000362665 119 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 U8.1-201ENST00000362843 134 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 U3.8-201ENST00000363675 217 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 Y_RNA.280-201ENST00000364765 112 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USB1Q9BQ65 RNU6-1336P-201ENST00000383886 109 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 SNORA70-201ENST00000384436 135 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 SNORA48.4-201ENST00000391089 134 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 AL139281.1-201ENST00000422120 335 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 AL691449.1-201ENST00000426570 421 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.68□□□□□ -1.66
USB1Q9BQ65 AC112498.1-201ENST00000444401 332 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 SNRPGP8-201ENST00000454064 226 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.68□□□□□ -1.66
USB1Q9BQ65 RNU7-115P-201ENST00000516433 55 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 RNU6-928P-201ENST00000516876 104 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.68□□□□□ -1.66
USB1Q9BQ65 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.68□□□□□ -1.66
USB1Q9BQ65 MIR4443-201ENST00000585052 53 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.68□□□□□ -1.66
USB1Q9BQ65 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.68□□□□□ -1.66
USB1Q9BQ65 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.68□□□□□ -1.66
USB1Q9BQ65 MIR3199-2-201ENST00000636243 86 ntBASIC4.68□□□□□ -1.66
USB1Q9BQ65 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
USB1Q9BQ65 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.67□□□□□ -1.66
USB1Q9BQ65 AL672167.1-204ENST00000641875 3017 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
USB1Q9BQ65 TLK1P1-201ENST00000456760 2440 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 AC138915.1-201ENST00000565427 1685 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USB1Q9BQ65 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USB1Q9BQ65 A2MP1-204ENST00000566278 4130 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USB1Q9BQ65 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
USB1Q9BQ65 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USB1Q9BQ65 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USB1Q9BQ65 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
USB1Q9BQ65 AL133243.3-201ENST00000617415 3004 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 Y_RNA.495-201ENST00000384435 112 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 AC005300.1-201ENST00000428401 373 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 NDUFB4P8-201ENST00000435351 367 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.67□□□□□ -1.66
USB1Q9BQ65 MTCO1P44-201ENST00000441935 243 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 RPS4XP2-201ENST00000458402 793 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 RPL23AP56-201ENST00000460778 453 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 RN7SL329P-201ENST00000467740 299 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.67□□□□□ -1.66
USB1Q9BQ65 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.67□□□□□ -1.66
USB1Q9BQ65 RNU2-44P-201ENST00000516795 194 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 IGKV2D-19-201ENST00000523346 262 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 AC015813.4-201ENST00000610469 179 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 MIR7155-201ENST00000615925 56 ntBASIC4.67□□□□□ -1.66
USB1Q9BQ65 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
USB1Q9BQ65 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USB1Q9BQ65 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
USB1Q9BQ65 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
USB1Q9BQ65 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USB1Q9BQ65 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 Z82209.1-201ENST00000422141 2135 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
USB1Q9BQ65 AC004944.1-201ENST00000517807 3059 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
USB1Q9BQ65 Y_RNA.114-201ENST00000363265 113 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 Y_RNA.120-201ENST00000363304 110 ntBASIC4.66□□□□□ -1.66
USB1Q9BQ65 AP002088.1-201ENST00000382740 395 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms