Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FGD4Q96M96 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FGD4Q96M96 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.1□□□□□ -1.75
FGD4Q96M96 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FGD4Q96M96 RNU6-428P-201ENST00000362942 107 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 SNORD50.1-201ENST00000362987 71 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 Y_RNA.276-201ENST00000364732 109 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 RNU6-784P-201ENST00000384330 106 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 Y_RNA.526-201ENST00000384572 110 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
FGD4Q96M96 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.1□□□□□ -1.75
FGD4Q96M96 AC007098.1-201ENST00000420122 367 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FGD4Q96M96 AC005326.1-201ENST00000429197 123 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.1□□□□□ -1.75
FGD4Q96M96 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FGD4Q96M96 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.1□□□□□ -1.75
FGD4Q96M96 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.1□□□□□ -1.75
FGD4Q96M96 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.1□□□□□ -1.75
FGD4Q96M96 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.1□□□□□ -1.75
FGD4Q96M96 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.1□□□□□ -1.75
FGD4Q96M96 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.1□□□□□ -1.75
FGD4Q96M96 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.1□□□□□ -1.75
FGD4Q96M96 RNU6-794P-201ENST00000517261 64 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 AC131281.1-201ENST00000522984 164 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 AC040926.1-201ENST00000530195 238 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 OR5D17P-201ENST00000531492 978 ntBASIC4.1□□□□□ -1.75
FGD4Q96M96 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.1□□□□□ -1.75
FGD4Q96M96 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.1□□□□□ -1.75
FGD4Q96M96 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FGD4Q96M96 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
FGD4Q96M96 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FGD4Q96M96 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
FGD4Q96M96 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.09□□□□□ -1.75
FGD4Q96M96 RNU4-35P-201ENST00000362588 141 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 RNU6-227P-201ENST00000362865 103 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 RNU6-78P-201ENST00000362897 107 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 RNU6-238P-201ENST00000363313 106 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 RNA5SP50-201ENST00000363731 107 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 SNORD17-201ENST00000390930 237 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 RNU6-700P-201ENST00000391043 107 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 SAR1AP2-201ENST00000392696 594 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 RNA5SP129-201ENST00000410276 118 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
FGD4Q96M96 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.09□□□□□ -1.75
FGD4Q96M96 AC079354.2-201ENST00000453523 154 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 AC025518.1-201ENST00000479856 347 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 RPL22P13-201ENST00000493291 347 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 CASP1P1-201ENST00000526345 212 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 AC006600.1-201ENST00000572529 153 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.09□□□□□ -1.75
FGD4Q96M96 AC107871.2-201ENST00000612894 502 ntBASIC4.09□□□□□ -1.75
FGD4Q96M96 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FGD4Q96M96 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.09□□□□□ -1.75
FGD4Q96M96 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
FGD4Q96M96 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
FGD4Q96M96 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
FGD4Q96M96 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.08□□□□□ -1.76
FGD4Q96M96 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
FGD4Q96M96 U3.6-201ENST00000363622 211 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 RNU6-336P-201ENST00000364891 107 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 Z98749.2-208ENST00000381646 500 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 RNU6-26P-201ENST00000383985 107 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 Y_RNA.551-201ENST00000384661 102 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 HLFP1-201ENST00000402375 499 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 U3.37-201ENST00000408528 213 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FGD4Q96M96 RPL26P27-201ENST00000414397 437 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 AC017083.1-201ENST00000428093 483 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 MTND3P9-201ENST00000429526 346 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 CBX3P6-201ENST00000430257 527 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 snoU109.2-201ENST00000459316 135 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 RPL21P104-201ENST00000464143 478 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.08□□□□□ -1.76
FGD4Q96M96 Y_RNA.668-201ENST00000516233 93 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 RNU6-1183P-201ENST00000517054 60 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.08□□□□□ -1.76
FGD4Q96M96 LINC00933-203ENST00000559812 219 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.08□□□□□ -1.76
FGD4Q96M96 MYL12BP1-201ENST00000569826 507 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 MIR3668-201ENST00000582138 75 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 AC011471.1-201ENST00000585766 187 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.08□□□□□ -1.76
FGD4Q96M96 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.08□□□□□ -1.76
FGD4Q96M96 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.08□□□□□ -1.76
FGD4Q96M96 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
FGD4Q96M96 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FGD4Q96M96 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
FGD4Q96M96 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
FGD4Q96M96 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
FGD4Q96M96 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FGD4Q96M96 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FGD4Q96M96 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
FGD4Q96M96 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.07□□□□□ -1.76
FGD4Q96M96 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FGD4Q96M96 RNU6-778P-201ENST00000363269 103 ntBASIC4.07□□□□□ -1.76
FGD4Q96M96 Y_RNA.188-201ENST00000363952 111 ntBASIC4.07□□□□□ -1.76
FGD4Q96M96 DEFB109C-201ENST00000382575 264 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms