Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 INTS6P1-201ENST00000504674 2530 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 RNU6-315P-201ENST00000362666 107 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 RNU6-457P-201ENST00000363999 107 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 MIR520G-201ENST00000385064 90 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 SNORA7.5-201ENST00000410672 110 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 AC016717.1-201ENST00000448918 286 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 ACA64.4-201ENST00000459070 127 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 AC025458.1-201ENST00000506046 166 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 PPBPP1-201ENST00000510807 373 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 SNORD19.2-201ENST00000516978 73 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 MIR4438-201ENST00000585271 93 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 AC008739.2-201ENST00000597006 317 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 MIR6809-201ENST00000612189 116 ntBASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MS4A3Q96HJ5 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 RNA5SP273-201ENST00000362484 113 ntBASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 RNA5SP477-201ENST00000362639 119 ntBASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 SNORA5.1-201ENST00000384275 131 ntBASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 SDC4P-201ENST00000453285 601 ntBASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 RNU7-14P-201ENST00000459331 62 ntBASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 RN7SL193P-201ENST00000491708 276 ntBASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 AC090255.1-201ENST00000495779 349 ntBASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 AL138895.2-201ENST00000603019 178 ntBASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 AL513534.2-201ENST00000603836 250 ntBASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 AC024884.1-201ENST00000620583 399 ntBASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A3Q96HJ5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 AC018809.2-201ENST00000602436 3823 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 Y_RNA.253-201ENST00000364562 112 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 MIR1265-201ENST00000408444 86 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 MIR548O-201ENST00000408583 114 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 HLA-DPA3-207ENST00000454398 229 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 RNU7-80P-201ENST00000459562 61 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 AC023141.12-201ENST00000512399 199 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 Y_RNA.667-201ENST00000516212 107 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 AC091979.2-201ENST00000607514 214 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 DLEU2_5.2-201ENST00000610606 84 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 AC079776.5-201ENST00000641920 211 ntBASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC5.19□□□□□ -1.58
MS4A3Q96HJ5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 SELENOWP1-201ENST00000322792 252 ntBASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 Y_RNA.440-201ENST00000384120 114 ntBASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 RNU6-948P-201ENST00000516374 107 ntBASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 RNA5SP438-201ENST00000516561 112 ntBASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 MIR4776-2-201ENST00000580204 80 ntBASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 AC022217.4-201ENST00000604389 163 ntBASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 MIR6778-201ENST00000617912 73 ntBASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 AC022400.9-201ENST00000623633 273 ntBASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 AC095038.3-201ENST00000634439 195 ntBASIC5.18□□□□□ -1.58
MS4A3Q96HJ5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms