Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL365434.2-201ENST00000607979 234 ntBASIC4.11□□□□□ -1.75
DDX11Q96FC9 AL355810.1-201ENST00000614629 552 ntBASIC4.11□□□□□ -1.75
DDX11Q96FC9 MIR8058-201ENST00000615737 89 ntBASIC4.11□□□□□ -1.75
DDX11Q96FC9 AC022149.2-201ENST00000621061 203 ntBASIC4.11□□□□□ -1.75
DDX11Q96FC9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX11Q96FC9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.11□□□□□ -1.75
DDX11Q96FC9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 MTND5P27-201ENST00000428871 1720 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 RNU6-1156P-201ENST00000410365 100 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 AL031274.1-201ENST00000450334 232 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 SUMO1P2-201ENST00000452524 304 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 AC006539.3-201ENST00000454258 129 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 RNU6-1132P-201ENST00000459214 107 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 SNRPGP3-201ENST00000469405 227 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 APOOP4-201ENST00000513530 597 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 GMPSP1-201ENST00000514075 579 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 AC040926.1-201ENST00000530195 238 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 CBX3P8-201ENST00000532412 525 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 MIR3186-201ENST00000577404 85 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 MIR548AC-201ENST00000585049 88 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 BDH2P1-201ENST00000602288 736 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 SNORD39.4-201ENST00000620099 78 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
DDX11Q96FC9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DDX11Q96FC9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
DDX11Q96FC9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX11Q96FC9 AC058791.1-201ENST00000608412 3198 ntBASIC4.1□□□□□ -1.75
DDX11Q96FC9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
DDX11Q96FC9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
DDX11Q96FC9 UBE2L2-201ENST00000254302 429 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 Y_RNA.26-201ENST00000362539 101 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 RNU1-33P-201ENST00000364249 162 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 RNU6-512P-201ENST00000364438 103 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 Y_RNA.350-201ENST00000365409 98 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
DDX11Q96FC9 Y_RNA.461-201ENST00000384263 103 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 RNU6-713P-201ENST00000384761 107 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 MT-TW-201ENST00000387382 68 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 AL445529.1-201ENST00000398713 389 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX11Q96FC9 AL353621.1-201ENST00000418219 243 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.09□□□□□ -1.75
DDX11Q96FC9 HMGB3P8-201ENST00000449709 577 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 HMGN2P16-201ENST00000456802 261 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 SNORD127-201ENST00000458892 86 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 FO393415.2-201ENST00000480085 343 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 AC108860.1-201ENST00000484521 383 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 VN1R104P-201ENST00000505115 1009 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.09□□□□□ -1.75
DDX11Q96FC9 AP000889.1-201ENST00000530968 660 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.09□□□□□ -1.75
DDX11Q96FC9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX11Q96FC9 AL512605.2-201ENST00000592972 256 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 AC004805.2-201ENST00000605382 482 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 AC034102.8-201ENST00000615146 484 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 AC141273.2-201ENST00000618989 130 ntBASIC4.09□□□□□ -1.75
DDX11Q96FC9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
DDX11Q96FC9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 RNU4-35P-201ENST00000362588 141 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 Y_RNA.214-201ENST00000364201 112 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 Y_RNA.222-201ENST00000364264 102 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 U3.42-201ENST00000408746 214 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 RNA5SP120-201ENST00000410900 112 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 RNU6-325P-201ENST00000411132 105 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 MTCO1P39-201ENST00000426148 480 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 ARF4P2-201ENST00000430209 526 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 HMGB1P27-201ENST00000431429 603 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 AC008155.2-201ENST00000464337 397 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 RNU6-927P-201ENST00000516199 100 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 SNORA31.8-201ENST00000516327 108 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 IGHV3-76-201ENST00000522465 295 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 TRAV32-201ENST00000553993 340 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 OR1M4P-201ENST00000589199 287 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 AC078899.3-201ENST00000599065 212 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 AP003355.3-201ENST00000623465 114 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 MIR3651-201ENST00000630427 90 ntBASIC4.08□□□□□ -1.76
DDX11Q96FC9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX11Q96FC9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX11Q96FC9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms