Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MTCYBP16-201ENST00000509187 1129 ntBASIC1.18□□□□□ -2.22
TOPBP1Q92547 AL161798.1-201ENST00000604630 131 ntBASIC1.18□□□□□ -2.22
TOPBP1Q92547 ELOCP5-201ENST00000604924 333 ntBASIC1.18□□□□□ -2.22
TOPBP1Q92547 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
TOPBP1Q92547 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TOPBP1Q92547 MIR126-201ENST00000362291 85 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 RNU6-512P-201ENST00000364438 103 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 RNU6-609P-201ENST00000365459 107 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 Y_RNA.390-201ENST00000383932 102 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 OR9R1P-201ENST00000412200 877 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 RPL21P24-201ENST00000413752 448 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TOPBP1Q92547 ISCA1P1-201ENST00000426679 387 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 SDAD1P3-201ENST00000427380 333 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.17□□□□□ -2.22
TOPBP1Q92547 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.17□□□□□ -2.22
TOPBP1Q92547 MTCYBP42-201ENST00000444653 1130 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 AL096829.2-201ENST00000446582 742 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 OR6C5P-201ENST00000452388 923 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 AC092001.1-201ENST00000453012 261 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 RPL37P6-201ENST00000460682 294 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 AC018868.1-201ENST00000491307 315 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 AC116655.1-201ENST00000508324 901 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 RNU6-496P-201ENST00000516145 99 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 RNU6-1225P-201ENST00000516336 65 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 RNU6-334P-201ENST00000517072 102 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.17□□□□□ -2.22
TOPBP1Q92547 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.17□□□□□ -2.22
TOPBP1Q92547 AC079598.5-201ENST00000547460 117 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.17□□□□□ -2.22
TOPBP1Q92547 AC104072.1-201ENST00000568817 668 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 MIR4713-201ENST00000582691 75 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.17□□□□□ -2.22
TOPBP1Q92547 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.17□□□□□ -2.22
TOPBP1Q92547 SNRPGP17-201ENST00000603780 214 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 PRR13P7-201ENST00000605538 430 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.17□□□□□ -2.22
TOPBP1Q92547 AL359314.1-201ENST00000616913 261 ntBASIC1.17□□□□□ -2.22
TOPBP1Q92547 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
TOPBP1Q92547 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
TOPBP1Q92547 AC078974.1-201ENST00000411597 223 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 AC127391.1-201ENST00000411737 98 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.16□□□□□ -2.22
TOPBP1Q92547 MRPS36P1-201ENST00000421291 307 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 MTCO2P1-201ENST00000424648 477 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.16□□□□□ -2.22
TOPBP1Q92547 USP9YP24-201ENST00000434374 697 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.16□□□□□ -2.22
TOPBP1Q92547 AC117454.1-201ENST00000491120 168 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 TPT1P8-201ENST00000510120 555 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 RN7SKP258-201ENST00000517151 304 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 AL356432.3-201ENST00000568952 465 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 AL713866.2-201ENST00000603579 219 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 AC006270.3-201ENST00000605967 1036 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 U6.99-201ENST00000637524 83 ntBASIC1.16□□□□□ -2.22
TOPBP1Q92547 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TOPBP1Q92547 Y_RNA.280-201ENST00000364765 112 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 RNU6-468P-201ENST00000384003 109 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 RNU11-3P-201ENST00000391111 133 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 AL591034.2-201ENST00000402839 359 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 AL133475.1-201ENST00000404414 305 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 RN7SKP61-201ENST00000410642 295 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 FABP5P15-201ENST00000453566 214 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 RNA5SP57-201ENST00000459463 123 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 AC006512.1-201ENST00000468816 291 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
TOPBP1Q92547 RNU6-1183P-201ENST00000517054 60 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 AC034114.1-201ENST00000520293 285 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 AC093012.1-202ENST00000549403 582 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 AL078605.1-201ENST00000603529 500 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.15□□□□□ -2.22
TOPBP1Q92547 AL356094.1-201ENST00000624663 1212 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 AL163152.1-201ENST00000642001 374 ntBASIC1.15□□□□□ -2.22
TOPBP1Q92547 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.15□□□□□ -2.23
TOPBP1Q92547 AC138393.1-203ENST00000327086 343 ntBASIC1.15□□□□□ -2.23
TOPBP1Q92547 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.15□□□□□ -2.23
TOPBP1Q92547 AC068533.2-201ENST00000411872 306 ntBASIC1.15□□□□□ -2.23
TOPBP1Q92547 UBE2D3P3-201ENST00000426992 425 ntBASIC1.15□□□□□ -2.23
TOPBP1Q92547 ELOCP30-201ENST00000447108 299 ntBASIC1.15□□□□□ -2.23
TOPBP1Q92547 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.15□□□□□ -2.23
TOPBP1Q92547 AC011005.2-201ENST00000487324 359 ntBASIC1.15□□□□□ -2.23
TOPBP1Q92547 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
TOPBP1Q92547 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.15□□□□□ -2.23
TOPBP1Q92547 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.15□□□□□ -2.23
TOPBP1Q92547 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.15□□□□□ -2.23
TOPBP1Q92547 AC073544.2-201ENST00000601155 540 ntBASIC1.15□□□□□ -2.23
TOPBP1Q92547 AC087045.1-201ENST00000605856 382 ntBASIC1.15□□□□□ -2.23
TOPBP1Q92547 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms