Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MTND4P25-201ENST00000441039 533 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 HMGN1P7-201ENST00000491722 313 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 AC016550.1-201ENST00000505348 785 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 AC116353.3-201ENST00000511215 249 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 RNA5SP216-201ENST00000516111 123 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 RNU6-143P-201ENST00000516942 93 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 AC010376.1-201ENST00000522101 334 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 BCRP9-201ENST00000605312 388 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 AC098614.4-201ENST00000607601 462 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 PART1_2.1-201ENST00000612397 250 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 AC099842.1-201ENST00000619919 596 ntBASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC112Q8NEF3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 ZNF29P-201ENST00000225587 168 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 FCF1P10-201ENST00000407590 479 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 MIR1305-201ENST00000408300 86 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 MIR1276-201ENST00000408707 83 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 AL591704.1-201ENST00000432574 275 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 LARP1BP3-201ENST00000437229 869 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 RPS29P28-201ENST00000446439 141 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 AL590365.1-201ENST00000450788 243 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 RNU6-276P-201ENST00000516114 96 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 AC091163.3-201ENST00000518269 1144 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 AP000907.2-201ENST00000530827 353 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 AC010900.2-201ENST00000604508 210 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 AC096772.1-201ENST00000609146 564 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC112Q8NEF3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 SNORD114-19-201ENST00000363072 75 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 MIR301A-201ENST00000385261 86 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AL136310.1-201ENST00000404926 654 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 RNU2-36P-201ENST00000410361 191 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 VPS26BP1-201ENST00000417155 755 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AL078601.1-201ENST00000444542 271 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 RPL36AP21-201ENST00000490372 323 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 MTCYBP43-201ENST00000513621 740 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 RNU6-586P-201ENST00000517265 104 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AC093249.1-201ENST00000567049 203 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AP001981.2-201ENST00000603241 418 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AC091965.5-201ENST00000624785 342 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AC090517.3-201ENST00000625170 141 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 AL512643.1-201ENST00000635735 524 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 MTND5P42-201ENST00000637720 498 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 ZNF680P1-201ENST00000436625 1469 ntBASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC112Q8NEF3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 SNORD14D-201ENST00000384390 87 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 RNU6-769P-201ENST00000384407 104 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 TIMM9P1-201ENST00000436122 256 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AC108059.3-201ENST00000456388 214 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 SNORD97-201ENST00000459187 142 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 MTND1P3-201ENST00000484956 952 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 RNU6-467P-201ENST00000517027 110 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 RNA5SP490-201ENST00000517141 136 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AC109329.1-201ENST00000518744 317 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 COPS8P3-201ENST00000526024 482 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AP003034.1-201ENST00000534621 422 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AP000763.2-201ENST00000540641 163 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 RRN3P3-201ENST00000549207 578 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AC025678.1-201ENST00000567861 338 ntBASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC112Q8NEF3 MIR544B-201ENST00000582372 78 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms