Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.69□□□□□ -1.66
NPAS3Q8IXF0 AL161798.1-201ENST00000604630 131 ntBASIC4.69□□□□□ -1.66
NPAS3Q8IXF0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.69□□□□□ -1.66
NPAS3Q8IXF0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPAS3Q8IXF0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NPAS3Q8IXF0 AL513302.2-201ENST00000562313 1842 ntBASIC4.69□□□□□ -1.66
NPAS3Q8IXF0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NPAS3Q8IXF0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NPAS3Q8IXF0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.69□□□□□ -1.66
NPAS3Q8IXF0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 Y_RNA.163-201ENST00000363702 113 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RNU6-105P-201ENST00000363909 104 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 Y_RNA.220-201ENST00000364244 109 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 U3.19-201ENST00000390893 196 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RNU6-1228P-201ENST00000391014 107 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 MIR1255A-201ENST00000408338 113 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RNA5SP317-201ENST00000410176 116 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 Y_RNA.617-201ENST00000410920 90 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RNA5SP311-201ENST00000411290 116 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 CKS1BP6-201ENST00000424932 240 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 AC006028.1-201ENST00000438379 402 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 AL591473.1-201ENST00000464297 313 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 AC091153.1-201ENST00000466297 402 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 SNRPGP7-201ENST00000469016 106 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RNA5SP315-201ENST00000516340 116 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RNA5SP312-201ENST00000517068 116 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RN7SL176P-201ENST00000580352 264 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 AL591034.3-201ENST00000605511 685 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 MIR8069-1-201ENST00000616627 86 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 MIR8069-2-201ENST00000621412 86 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RNA5SP196-201ENST00000625967 102 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 MIR4275-201ENST00000636486 87 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 CPHL1P-201ENST00000461341 3407 ntBASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS3Q8IXF0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 AC010300.1-201ENST00000600671 5134 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 RNU6-508P-201ENST00000363231 103 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 RNU1-132P-201ENST00000364300 164 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 Y_RNA.244-201ENST00000364484 109 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 RNU1-64P-201ENST00000365443 163 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 MIR137-201ENST00000385223 102 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 MIR134-201ENST00000385258 73 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 U3.40-201ENST00000408706 208 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 EIF4HP2-201ENST00000424380 563 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 RNA5SP103-201ENST00000459503 118 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 AC006380.1-201ENST00000603598 186 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 AC113403.1-201ENST00000604910 193 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 AC009831.4-201ENST00000620744 325 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 MTND5P18-201ENST00000445624 1801 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 MFSD8-242ENST00000641690 4199 ntBASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NPAS3Q8IXF0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 AC092268.1-201ENST00000342691 405 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 MIR383-201ENST00000362257 73 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 RNU1-94P-201ENST00000362627 173 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 SNORA72.4-201ENST00000384174 132 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 RNU1-13P-201ENST00000384499 162 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 RPL21P17-201ENST00000397467 475 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 AL512633.1-201ENST00000399931 655 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 MIR1302-5-201ENST00000408164 150 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 MIR1271-201ENST00000408537 86 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 Y_RNA.622-201ENST00000411091 108 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 RN7SKP53-201ENST00000411337 315 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 AC074117.2-201ENST00000417130 397 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 HMGB3P8-201ENST00000449709 577 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 RPL30P12-201ENST00000474666 353 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 PARP4P3-201ENST00000510265 317 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms