Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 MTND5P30-201ENST00000452896 1731 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 RPL9P7-201ENST00000330965 580 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 Y_RNA.5-201ENST00000362334 102 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-1115P-201ENST00000362490 106 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-1106P-201ENST00000390845 107 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 AL138878.1-201ENST00000405131 347 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 AL591034.1-201ENST00000407447 340 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 HMGN2P30-201ENST00000423237 256 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 AL513043.1-201ENST00000439124 535 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 AC107083.1-201ENST00000439643 279 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-1037P-201ENST00000459571 107 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 RPL9P9-202ENST00000466501 579 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 RPL7P47-201ENST00000497299 556 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 PTP4A1P4-201ENST00000512479 322 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-1045P-201ENST00000516321 107 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-703P-201ENST00000516946 107 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 AC022634.1-201ENST00000520765 532 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 CYCSP39-201ENST00000565821 309 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 BNIP3P16-201ENST00000589779 534 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 AC009314.1-201ENST00000603871 304 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 AL591516.1-201ENST00000611326 274 ntBASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPA1Q8IWL2 MTND4P1-201ENST00000457501 1466 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC090740.1-201ENST00000623193 2262 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 FAM35BP-202ENST00000497389 3337 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 Y_RNA.28-201ENST00000362554 111 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 Y_RNA.48-201ENST00000362710 103 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-428P-201ENST00000362942 107 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 Y_RNA.112-201ENST00000363250 102 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 Z98749.2-208ENST00000381646 500 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 Y_RNA.463-201ENST00000384271 102 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 RN7SKP220-201ENST00000410611 288 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 RPS29P20-201ENST00000489592 171 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC022493.2-201ENST00000506122 481 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AK3P2-201ENST00000507976 429 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC006445.2-201ENST00000510061 472 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-470P-201ENST00000515954 104 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-976P-201ENST00000516086 111 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-699P-201ENST00000517081 110 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 RN7SKP295-201ENST00000517264 153 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AP002404.1-201ENST00000532005 451 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 MTND4LP5-201ENST00000605152 292 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC116312.1-201ENST00000606841 314 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 AC093732.2-201ENST00000607950 274 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 PLCE1P1-201ENST00000622094 305 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 U2.21-201ENST00000637295 81 ntBASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.17□□□□□ -1.9
SFTPA1Q8IWL2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-778P-201ENST00000363269 103 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-270P-201ENST00000364131 105 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 SNORA63C-201ENST00000364578 129 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 RNU5E-7P-201ENST00000365290 117 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-898P-201ENST00000365627 104 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 RNU1-73P-201ENST00000383971 164 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-72P-201ENST00000384285 79 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-738P-201ENST00000384531 106 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 MIR521-1-201ENST00000384902 87 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 AL513475.1-201ENST00000406602 315 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 AL117339.3-201ENST00000418733 162 ntBASIC3.16□□□□□ -1.9
SFTPA1Q8IWL2 BX276092.3-201ENST00000424182 230 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms