Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC087683.1-201ENST00000591187 441 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC012507.3-201ENST00000603556 477 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AL355297.2-201ENST00000604792 129 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC013412.1-201ENST00000610687 192 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC005609.4-201ENST00000625071 447 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC243829.7-201ENST00000633081 225 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 RNU6-552P-201ENST00000362869 119 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 RNU6-78P-201ENST00000362897 107 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 U3.12-201ENST00000364498 214 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 RNU6-487P-201ENST00000365430 104 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 RNU6-996P-201ENST00000365438 107 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 RNU6-1103P-201ENST00000384150 107 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AC068050.1-201ENST00000394891 380 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 RNU2-3P-201ENST00000410144 191 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 CYCSP33-201ENST00000414485 327 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AC074117.2-201ENST00000417130 397 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AC003685.2-201ENST00000422795 395 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 MTCYBP8-201ENST00000422855 651 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AL591043.1-201ENST00000432461 424 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AC027673.1-201ENST00000456245 405 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 SRIP1-201ENST00000489235 288 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AF213884.2-201ENST00000510417 903 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 RN7SKP219-201ENST00000516825 296 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AP005902.1-201ENST00000521358 186 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 CKS1BP7-201ENST00000522230 235 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 CBX3P7-201ENST00000532876 502 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AC060766.3-201ENST00000591442 263 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AL391646.1-201ENST00000603860 190 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AL121917.1-203ENST00000605534 577 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 Z82243.1-201ENST00000609432 473 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 uc_338.15-201ENST00000615470 191 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AL354950.2-201ENST00000617939 290 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AC010297.1-201ENST00000623948 149 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AC022418.1-201ENST00000624118 445 ntBASIC2.63□□□□□ -1.99
PRPF39Q86UA1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.63□□□□□ -1.99
PRPF39Q86UA1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 MIR6073-201ENST00000352083 89 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 SNORD62.1-201ENST00000362541 86 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 RNU6-212P-201ENST00000362642 104 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 HMGN2P35-201ENST00000412164 270 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 BTF3L4P1-201ENST00000413813 468 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AL139109.1-201ENST00000455491 297 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AC079140.5-201ENST00000507882 310 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AP001893.2-201ENST00000526949 202 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AC243972.3-201ENST00000539655 198 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AC009063.1-201ENST00000563342 702 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 RPL30P11-203ENST00000598995 310 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AC116312.1-201ENST00000606841 314 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AC245008.1-201ENST00000608123 476 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 AC048344.4-201ENST00000619744 527 ntBASIC2.62□□□□□ -1.99
PRPF39Q86UA1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PRPF39Q86UA1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PRPF39Q86UA1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-37P-201ENST00000362692 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-11P-201ENST00000364234 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-25P-201ENST00000383873 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-1-201ENST00000383898 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-48P-201ENST00000384161 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-36P-201ENST00000384172 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-4P-201ENST00000384205 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-5P-201ENST00000384238 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-3P-201ENST00000384314 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 Y_RNA.480-201ENST00000384364 102 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-16P-201ENST00000384385 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-15P-201ENST00000384534 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-1127P-201ENST00000384580 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-2-201ENST00000384627 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-29P-201ENST00000384637 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-9-201ENST00000384776 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-33P-201ENST00000384793 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 SNORD37.1-201ENST00000390968 65 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-903P-201ENST00000391270 109 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNA5SP181-201ENST00000410246 98 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms