Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 AC092268.1-201ENST00000342691 405 ntBASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 SNORD115-30-201ENST00000364117 82 ntBASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-1107P-201ENST00000364817 104 ntBASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 AC007969.2-201ENST00000441891 191 ntBASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 AL590399.6-201ENST00000446396 307 ntBASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 RN7SKP234-201ENST00000517173 224 ntBASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 SNORD84-203ENST00000584275 78 ntBASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNFT1Q5M7Z0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 DEFB108F-201ENST00000344638 222 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 SNORA70F-201ENST00000384142 135 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-136P-201ENST00000384663 107 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 SNORA79-201ENST00000408376 140 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 COX5BP7-201ENST00000414780 274 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 AC078809.1-201ENST00000427601 140 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 snoU13.1-201ENST00000459157 104 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 AC091868.1-201ENST00000508746 304 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 ENPP7P9-201ENST00000514456 627 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 AC093331.1-201ENST00000521474 169 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 AC040958.1-201ENST00000561102 201 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 MIR5096-201ENST00000583713 70 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 AL121932.1-201ENST00000605542 214 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 MIR6715B-201ENST00000637172 77 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 AC025031.4-201ENST00000621248 3271 ntBASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNFT1Q5M7Z0 AL136964.1-201ENST00000622038 2990 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 SNORD45.3-201ENST00000363836 72 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 RNU1-140P-201ENST00000365040 165 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 Y_RNA.310-201ENST00000365063 113 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 Y_RNA.341-201ENST00000365341 102 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-1074P-201ENST00000383995 104 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-1152P-201ENST00000384576 107 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 AC091390.1-201ENST00000433904 331 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 AC016831.4-201ENST00000438302 307 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-970P-201ENST00000516312 107 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 AL121603.1-201ENST00000553815 142 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 MIR5699-201ENST00000578903 90 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 RPL30P11-203ENST00000598995 310 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 AL442128.1-201ENST00000615151 90 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 MIR6758-201ENST00000620653 63 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 U6.99-201ENST00000637524 83 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms