Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 MUC2-202ENST00000613187 4845 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CTC1Q2NKJ3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.61
CTC1Q2NKJ3 ZFRP1-201ENST00000457579 2970 ntBASIC4.96□□□□□ -1.61
CTC1Q2NKJ3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 Y_RNA.114-201ENST00000363265 113 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 RNU6-1048P-201ENST00000364054 107 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 Y_RNA.498-201ENST00000384460 102 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 RNU2-54P-201ENST00000410299 190 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 EDDM3CP-201ENST00000415977 425 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 EIF1AXP1-201ENST00000419267 435 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 AL135790.2-201ENST00000437701 267 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 RPL39P29-201ENST00000447779 157 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 Y_RNA.649-201ENST00000459077 103 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 AC108145.1-201ENST00000503770 153 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 RN7SKP12-201ENST00000516275 143 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 MRPL49P2-201ENST00000521066 465 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 ZNF192P1-203ENST00000565888 810 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 AC006130.2-201ENST00000586202 326 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 RNA5SP108-201ENST00000605921 117 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 AC010999.1-201ENST00000611856 324 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 AL078604.3-201ENST00000615580 211 ntBASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.96□□□□□ -1.62
CTC1Q2NKJ3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 U8.1-201ENST00000362843 134 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 RNU6-324P-201ENST00000363957 106 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 RNU6-173P-201ENST00000364215 104 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 RNU1-82P-201ENST00000390851 165 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 SNORD78.1-201ENST00000390866 65 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 RNA5SP171-201ENST00000391071 115 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 RPS26P8-201ENST00000393490 348 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 snoU13.22-201ENST00000459428 104 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 AC087588.1-201ENST00000462203 316 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 RN7SL810P-201ENST00000493031 276 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 RNU5F-2P-201ENST00000516066 82 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 ARF4P1-201ENST00000605447 541 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 AL391903.3-201ENST00000612158 163 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 AC131238.1-201ENST00000617135 328 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 AC024581.2-201ENST00000619986 252 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTC1Q2NKJ3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 AL022322.2-201ENST00000624072 20397 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 RNU6-873P-201ENST00000363833 107 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 RNU6-105P-201ENST00000363909 104 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 RNU6-1336P-201ENST00000383886 109 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 SNORA51.10-201ENST00000384418 136 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 AL606845.1-201ENST00000404881 255 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 AC009963.1-201ENST00000417265 157 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 EIF4HP2-201ENST00000424380 563 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 H2AFZP5-201ENST00000446960 382 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 RN7SL517P-201ENST00000462240 305 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 SNORA31.9-201ENST00000516429 84 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 AL356489.2-201ENST00000566968 3528 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 AC010329.5-201ENST00000623497 2174 ntBASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CTC1Q2NKJ3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms