Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 RNU6-308P-201ENST00000390957 107 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 RNU6-1197P-201ENST00000391183 107 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC093151.1-201ENST00000427711 313 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 AL139132.1-201ENST00000431587 344 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 RPL12P25-201ENST00000455592 494 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC091179.1-201ENST00000461606 579 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC097462.2-201ENST00000504623 481 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC087854.1-201ENST00000519706 414 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC026371.1-201ENST00000551867 419 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 MIR4474-201ENST00000579189 78 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 AC244517.12-201ENST00000623581 663 ntBASIC3.67□□□□□ -1.82
ATP2B3Q16720 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATP2B3Q16720 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.67□□□□□ -1.82
ATP2B3Q16720 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATP2B3Q16720 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATP2B3Q16720 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.66□□□□□ -1.82
ATP2B3Q16720 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.66□□□□□ -1.82
ATP2B3Q16720 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATP2B3Q16720 RNU6-1059P-201ENST00000363752 98 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 SNORD42.2-201ENST00000365570 69 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 RNU6-395P-201ENST00000365662 106 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 Y_RNA.480-201ENST00000384364 102 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ATP2B3Q16720 AL360182.1-201ENST00000397433 468 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 EEF1A1P41-201ENST00000414667 207 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.66□□□□□ -1.82
ATP2B3Q16720 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.66□□□□□ -1.82
ATP2B3Q16720 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.66□□□□□ -1.82
ATP2B3Q16720 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.66□□□□□ -1.82
ATP2B3Q16720 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.66□□□□□ -1.82
ATP2B3Q16720 RNU7-138P-201ENST00000459479 64 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 HMGN1P10-201ENST00000474557 553 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 RPL7P42-201ENST00000481005 679 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 AC011005.2-201ENST00000487324 359 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATP2B3Q16720 AC093303.1-201ENST00000514549 295 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 MIR892C-201ENST00000516410 77 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 RNU1-103P-201ENST00000516502 125 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 AC007938.3-201ENST00000604965 623 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 AC002076.2-201ENST00000617362 122 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATP2B3Q16720 KPNA2P1-201ENST00000458289 1591 ntBASIC3.66□□□□□ -1.82
ATP2B3Q16720 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATP2B3Q16720 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATP2B3Q16720 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATP2B3Q16720 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ATP2B3Q16720 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATP2B3Q16720 FAM35CP-201ENST00000554755 2470 ntBASIC3.65□□□□□ -1.82
ATP2B3Q16720 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
ATP2B3Q16720 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
ATP2B3Q16720 SNORA80A-201ENST00000363922 136 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 RNU6-310P-201ENST00000384655 107 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 SNORA1.3-201ENST00000384676 136 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 snosnR66.1-201ENST00000391095 99 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 U3.26-201ENST00000391236 204 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 Y_RNA.646-201ENST00000410980 101 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATP2B3Q16720 AC245054.2-201ENST00000415639 319 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.65□□□□□ -1.83
ATP2B3Q16720 TMEM167AP1-201ENST00000423409 219 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 SNAP23P1-201ENST00000433229 246 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AL512844.2-201ENST00000433990 593 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 HIGD1AP11-201ENST00000438361 280 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AC107083.1-201ENST00000439643 279 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 Z82210.1-201ENST00000440037 231 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AC025750.2-201ENST00000442609 450 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 RPL37P4-201ENST00000448908 268 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 SSXP4-201ENST00000451349 245 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 MIR2053-201ENST00000459295 91 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AC096576.1-201ENST00000489014 359 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.65□□□□□ -1.83
ATP2B3Q16720 Y_RNA.670-201ENST00000516255 105 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 SCARNA13-201ENST00000516672 275 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 SNORA31.19-201ENST00000517079 126 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.65□□□□□ -1.83
ATP2B3Q16720 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.65□□□□□ -1.83
ATP2B3Q16720 MIR3171-201ENST00000584270 74 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.65□□□□□ -1.83
ATP2B3Q16720 AL080274.1-201ENST00000605565 220 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AC009229.3-201ENST00000608056 282 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 MIR6076-201ENST00000617521 113 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AC010378.1-201ENST00000619270 362 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 AL669831.3-213ENST00000636676 183 ntBASIC3.65□□□□□ -1.83
ATP2B3Q16720 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATP2B3Q16720 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATP2B3Q16720 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATP2B3Q16720 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.64□□□□□ -1.83
ATP2B3Q16720 RNU6-37P-201ENST00000362692 107 ntBASIC3.64□□□□□ -1.83
ATP2B3Q16720 Y_RNA.151-201ENST00000363566 112 ntBASIC3.64□□□□□ -1.83
ATP2B3Q16720 RNU6-11P-201ENST00000364234 107 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms