Protein–RNA interactions for Protein: Q15059

BRD3, Bromodomain-containing protein 3, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3Q15059 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.2□□□□□ -1.9
BRD3Q15059 MIR3688-2-201ENST00000636963 87 ntBASIC3.2□□□□□ -1.9
BRD3Q15059 AC002543.1-201ENST00000299783 1954 ntBASIC3.2□□□□□ -1.9
BRD3Q15059 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
BRD3Q15059 Y_RNA.89-201ENST00000363031 102 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 RNU1-140P-201ENST00000365040 165 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 EIF4E2P1-201ENST00000393781 255 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRD3Q15059 AC008267.5-201ENST00000424928 265 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 SRIP2-201ENST00000428470 166 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 MTND1P4-201ENST00000435196 415 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRD3Q15059 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.19□□□□□ -1.9
BRD3Q15059 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.19□□□□□ -1.9
BRD3Q15059 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.19□□□□□ -1.9
BRD3Q15059 AC073901.1-201ENST00000462471 408 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 HMGN2P26-201ENST00000463169 339 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 AC091153.1-201ENST00000466297 402 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 RPL30P12-201ENST00000474666 353 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.19□□□□□ -1.9
BRD3Q15059 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.19□□□□□ -1.9
BRD3Q15059 HPRT1P3-201ENST00000539521 576 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 PSMA3P-201ENST00000555485 635 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 MIR5692C1-201ENST00000585309 91 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.19□□□□□ -1.9
BRD3Q15059 BNIP3P25-201ENST00000596023 559 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 RMST_3.1-201ENST00000611651 109 ntBASIC3.19□□□□□ -1.9
BRD3Q15059 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
BRD3Q15059 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BRD3Q15059 RPL9P7-201ENST00000330965 580 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 RNA5SP125-201ENST00000364843 120 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 RNU6-534P-201ENST00000364877 106 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 RNA5SP267-201ENST00000364893 126 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 Y_RNA.573-201ENST00000384763 105 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 SNORD73A-201ENST00000386062 65 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
BRD3Q15059 RNU4-26P-201ENST00000410270 107 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 RNU6-1245P-201ENST00000411130 106 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 FCF1P9-201ENST00000412546 282 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 AC003685.2-201ENST00000422795 395 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BRD3Q15059 AC005326.1-201ENST00000429197 123 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.18□□□□□ -1.9
BRD3Q15059 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BRD3Q15059 RN7SL297P-201ENST00000483161 293 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 AC097462.2-201ENST00000504623 481 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 AK3P2-201ENST00000507976 429 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 AC011352.1-201ENST00000512300 793 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 RNU6-718P-201ENST00000516166 105 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 Y_RNA.665-201ENST00000516177 98 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 AC087854.1-201ENST00000519706 414 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 RNU6-323P-201ENST00000521915 107 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 AC103996.1-201ENST00000555468 102 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 BNIP3P16-201ENST00000589779 534 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 RPL23AP88-201ENST00000605759 454 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 AL357078.3-201ENST00000607528 618 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 AL359198.2-201ENST00000611836 194 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 HMGB1P24-202ENST00000615653 685 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 AC024614.3-201ENST00000637860 256 ntBASIC3.18□□□□□ -1.9
BRD3Q15059 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.18□□□□□ -1.9
BRD3Q15059 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.18□□□□□ -1.9
BRD3Q15059 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
BRD3Q15059 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
BRD3Q15059 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BRD3Q15059 RNU6-212P-201ENST00000362642 104 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 Y_RNA.40-201ENST00000362645 93 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 RNU6-529P-201ENST00000363383 104 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 RNA5SP120-201ENST00000410900 112 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 RNU6-293P-201ENST00000411259 106 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.17□□□□□ -1.9
BRD3Q15059 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.17□□□□□ -1.9
BRD3Q15059 MRPS10P2-201ENST00000431226 381 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 BX510359.1-201ENST00000456973 237 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 AC090515.1-201ENST00000465295 476 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 AC083904.1-201ENST00000487828 231 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 RNU2-53P-201ENST00000516257 147 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 RNU6-826P-201ENST00000516827 104 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.17□□□□□ -1.9
BRD3Q15059 ELOCP31-201ENST00000540463 467 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.17□□□□□ -1.9
BRD3Q15059 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BRD3Q15059 AC107304.1-201ENST00000604229 296 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 AC073657.2-201ENST00000605661 303 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 AC122108.2-201ENST00000611946 526 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 AC009233.1-201ENST00000616477 371 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 AC007792.1-201ENST00000623023 402 ntBASIC3.17□□□□□ -1.9
BRD3Q15059 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.17□□□□□ -1.9
BRD3Q15059 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BRD3Q15059 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BRD3Q15059 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
BRD3Q15059 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.16□□□□□ -1.9
BRD3Q15059 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
BRD3Q15059 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
BRD3Q15059 U3.12-201ENST00000364498 214 ntBASIC3.16□□□□□ -1.9
BRD3Q15059 Y_RNA.295-201ENST00000364918 102 ntBASIC3.16□□□□□ -1.9
BRD3Q15059 RNU6-877P-201ENST00000383868 107 ntBASIC3.16□□□□□ -1.9
BRD3Q15059 Y_RNA.453-201ENST00000384223 109 ntBASIC3.16□□□□□ -1.9
BRD3Q15059 MIR544A-201ENST00000384855 91 ntBASIC3.16□□□□□ -1.9
BRD3Q15059 MIR34B-201ENST00000385076 84 ntBASIC3.16□□□□□ -1.9
BRD3Q15059 RPS29P13-201ENST00000402041 169 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms