Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AP004607.1-201ENST00000524456 203 ntBASIC3.47□□□□□ -1.85
PER3P56645 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.47□□□□□ -1.85
PER3P56645 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.47□□□□□ -1.85
PER3P56645 MIR5696-201ENST00000578474 85 ntBASIC3.47□□□□□ -1.85
PER3P56645 MIR5047-201ENST00000579212 100 ntBASIC3.47□□□□□ -1.85
PER3P56645 MIR5187-201ENST00000583479 76 ntBASIC3.47□□□□□ -1.85
PER3P56645 AC020895.1-201ENST00000595362 272 ntBASIC3.47□□□□□ -1.85
PER3P56645 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.47□□□□□ -1.85
PER3P56645 SCARNA15.3-201ENST00000626315 122 ntBASIC3.47□□□□□ -1.85
PER3P56645 SCARNA4.1-201ENST00000628597 123 ntBASIC3.47□□□□□ -1.85
PER3P56645 AC119674.1-207ENST00000641355 633 ntBASIC3.47□□□□□ -1.85
PER3P56645 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.47□□□□□ -1.85
PER3P56645 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PER3P56645 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PER3P56645 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
PER3P56645 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.47□□□□□ -1.85
PER3P56645 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PER3P56645 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PER3P56645 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
PER3P56645 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
PER3P56645 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PER3P56645 RNA5SP295-201ENST00000362655 121 ntBASIC3.46□□□□□ -1.86
PER3P56645 RNU6-99P-201ENST00000364721 107 ntBASIC3.46□□□□□ -1.86
PER3P56645 RNU1-100P-201ENST00000365255 165 ntBASIC3.46□□□□□ -1.86
PER3P56645 RNU1-115P-201ENST00000365329 160 ntBASIC3.46□□□□□ -1.86
PER3P56645 Y_RNA.364-201ENST00000365532 101 ntBASIC3.46□□□□□ -1.86
PER3P56645 Y_RNA.428-201ENST00000384078 102 ntBASIC3.46□□□□□ -1.86
PER3P56645 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PER3P56645 AP000907.1-201ENST00000428428 510 ntBASIC3.46□□□□□ -1.86
PER3P56645 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.46□□□□□ -1.86
PER3P56645 HMGB1P37-201ENST00000439613 609 ntBASIC3.46□□□□□ -1.86
PER3P56645 RPS3AP46-201ENST00000448352 682 ntBASIC3.46□□□□□ -1.86
PER3P56645 RPL26P9-201ENST00000457466 433 ntBASIC3.46□□□□□ -1.86
PER3P56645 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.46□□□□□ -1.86
PER3P56645 SNORD105B-201ENST00000458770 79 ntBASIC3.46□□□□□ -1.86
PER3P56645 snoU13.28-201ENST00000459235 104 ntBASIC3.46□□□□□ -1.86
PER3P56645 RN7SL601P-201ENST00000471221 293 ntBASIC3.46□□□□□ -1.86
PER3P56645 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PER3P56645 AC022695.1-201ENST00000522089 237 ntBASIC3.46□□□□□ -1.86
PER3P56645 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.46□□□□□ -1.86
PER3P56645 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.46□□□□□ -1.86
PER3P56645 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.46□□□□□ -1.86
PER3P56645 MIR6076-201ENST00000617521 113 ntBASIC3.46□□□□□ -1.86
PER3P56645 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PER3P56645 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PER3P56645 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.46□□□□□ -1.86
PER3P56645 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.86
PER3P56645 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PER3P56645 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PER3P56645 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
PER3P56645 UBE3AP2-201ENST00000429033 2259 ntBASIC3.45□□□□□ -1.86
PER3P56645 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.45□□□□□ -1.86
PER3P56645 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PER3P56645 RNY1P16-201ENST00000363063 111 ntBASIC3.45□□□□□ -1.86
PER3P56645 RNA5SP50-201ENST00000363731 107 ntBASIC3.45□□□□□ -1.86
PER3P56645 U1.1-201ENST00000384101 164 ntBASIC3.45□□□□□ -1.86
PER3P56645 Y_RNA.459-201ENST00000384251 102 ntBASIC3.45□□□□□ -1.86
PER3P56645 Y_RNA.645-201ENST00000391229 102 ntBASIC3.45□□□□□ -1.86
PER3P56645 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.45□□□□□ -1.86
PER3P56645 NUP35P1-201ENST00000422734 947 ntBASIC3.45□□□□□ -1.86
PER3P56645 EIF4EP2-201ENST00000422816 654 ntBASIC3.45□□□□□ -1.86
PER3P56645 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.45□□□□□ -1.86
PER3P56645 HMGN2P10-201ENST00000448085 265 ntBASIC3.45□□□□□ -1.86
PER3P56645 AC079354.2-201ENST00000453523 154 ntBASIC3.45□□□□□ -1.86
PER3P56645 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.45□□□□□ -1.86
PER3P56645 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.45□□□□□ -1.86
PER3P56645 AC105758.1-201ENST00000506038 399 ntBASIC3.45□□□□□ -1.86
PER3P56645 RNU4-77P-201ENST00000516692 156 ntBASIC3.45□□□□□ -1.86
PER3P56645 SNORA31.18-201ENST00000517043 134 ntBASIC3.45□□□□□ -1.86
PER3P56645 Y_RNA.720-201ENST00000517166 92 ntBASIC3.45□□□□□ -1.86
PER3P56645 YPEL5P3-201ENST00000547227 352 ntBASIC3.45□□□□□ -1.86
PER3P56645 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.45□□□□□ -1.86
PER3P56645 HMGN2P15-201ENST00000585707 270 ntBASIC3.45□□□□□ -1.86
PER3P56645 AC092447.9-201ENST00000603395 144 ntBASIC3.45□□□□□ -1.86
PER3P56645 HMGB1P24-202ENST00000615653 685 ntBASIC3.45□□□□□ -1.86
PER3P56645 AC002076.2-201ENST00000617362 122 ntBASIC3.45□□□□□ -1.86
PER3P56645 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.45□□□□□ -1.86
PER3P56645 AC097372.5-201ENST00000623665 376 ntBASIC3.45□□□□□ -1.86
PER3P56645 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.45□□□□□ -1.86
PER3P56645 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.45□□□□□ -1.86
PER3P56645 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PER3P56645 AC091152.2-201ENST00000591628 2569 ntBASIC3.45□□□□□ -1.86
PER3P56645 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PER3P56645 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.44□□□□□ -1.86
PER3P56645 MTND5P7-201ENST00000413558 1798 ntBASIC3.44□□□□□ -1.86
PER3P56645 Y_RNA.80-201ENST00000362996 102 ntBASIC3.44□□□□□ -1.86
PER3P56645 AC117470.1-201ENST00000381974 330 ntBASIC3.44□□□□□ -1.86
PER3P56645 Y_RNA.485-201ENST00000384395 102 ntBASIC3.44□□□□□ -1.86
PER3P56645 RNVU1-14-201ENST00000384770 164 ntBASIC3.44□□□□□ -1.86
PER3P56645 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PER3P56645 AL138885.1-201ENST00000405921 675 ntBASIC3.44□□□□□ -1.86
PER3P56645 FTH1P15-201ENST00000406984 280 ntBASIC3.44□□□□□ -1.86
PER3P56645 RNU6-985P-201ENST00000410182 104 ntBASIC3.44□□□□□ -1.86
PER3P56645 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.44□□□□□ -1.86
PER3P56645 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.44□□□□□ -1.86
PER3P56645 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.44□□□□□ -1.86
PER3P56645 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.44□□□□□ -1.86
PER3P56645 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PER3P56645 AL714022.1-201ENST00000439897 151 ntBASIC3.44□□□□□ -1.86
PER3P56645 RPS29P31-201ENST00000446147 164 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms