Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.17□□□□□ -1.9
SUMO3P55854 AC034105.4-201ENST00000568304 277 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.17□□□□□ -1.9
SUMO3P55854 AC005899.2-201ENST00000584353 90 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.17□□□□□ -1.9
SUMO3P55854 RNVU1-4-201ENST00000612985 164 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 AC002064.3-201ENST00000623448 346 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 AC022140.2-201ENST00000623500 188 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SUMO3P55854 AL021368.2-201ENST00000606125 5352 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SUMO3P55854 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SUMO3P55854 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SUMO3P55854 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SUMO3P55854 TNPO1P3-201ENST00000436471 2662 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.16□□□□□ -1.9
SUMO3P55854 Y_RNA.2-201ENST00000362330 96 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 Y_RNA.187-201ENST00000363918 113 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SUMO3P55854 Y_RNA.404-201ENST00000383978 102 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 Y_RNA.419-201ENST00000384041 102 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 Y_RNA.473-201ENST00000384333 102 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 RNU6-1222P-201ENST00000384615 107 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 RNU6-310P-201ENST00000384655 107 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 MIR544A-201ENST00000384855 91 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 MIR218-2-201ENST00000385006 110 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SUMO3P55854 SNORA48.8-201ENST00000391324 134 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 RPS29P4-201ENST00000414733 161 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 DBIP2-201ENST00000419076 262 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 EIF4EP2-201ENST00000422816 654 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 USMG5P1-201ENST00000425964 177 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 Z82205.1-201ENST00000428456 297 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.16□□□□□ -1.9
SUMO3P55854 RPL30P15-201ENST00000457129 321 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 RPL7P42-201ENST00000481005 679 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.16□□□□□ -1.9
SUMO3P55854 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.16□□□□□ -1.9
SUMO3P55854 RNU6-307P-201ENST00000516743 106 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 AC009812.2-201ENST00000517657 457 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.16□□□□□ -1.9
SUMO3P55854 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.16□□□□□ -1.9
SUMO3P55854 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.16□□□□□ -1.9
SUMO3P55854 AC109446.1-201ENST00000566172 220 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 MIR4273-201ENST00000582824 84 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 MIR4719-201ENST00000585233 84 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 AC012493.2-201ENST00000595083 291 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.16□□□□□ -1.9
SUMO3P55854 AL627309.6-201ENST00000606857 840 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 U3.45-201ENST00000607547 219 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 U4.6-201ENST00000621618 127 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.16□□□□□ -1.9
SUMO3P55854 SNORA50A-202ENST00000629536 136 ntBASIC3.16□□□□□ -1.9
SUMO3P55854 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SUMO3P55854 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SUMO3P55854 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SUMO3P55854 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SUMO3P55854 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SUMO3P55854 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.15□□□□□ -1.9
SUMO3P55854 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.15□□□□□ -1.9
SUMO3P55854 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.15□□□□□ -1.9
SUMO3P55854 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SUMO3P55854 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.9
SUMO3P55854 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SUMO3P55854 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.15□□□□□ -1.91
SUMO3P55854 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SUMO3P55854 U3.6-201ENST00000363622 211 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 RNU6-784P-201ENST00000384330 106 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 AL512633.1-201ENST00000399931 655 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 Y_RNA.646-201ENST00000410980 101 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 RHEBP3-201ENST00000411920 351 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 AP000907.1-201ENST00000428428 510 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.15□□□□□ -1.91
SUMO3P55854 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.15□□□□□ -1.91
SUMO3P55854 AL031659.1-201ENST00000447075 539 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.15□□□□□ -1.91
SUMO3P55854 RPL31P41-201ENST00000477967 372 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 RNU6-1213P-201ENST00000517075 94 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 TGIF1P1-201ENST00000558095 802 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.15□□□□□ -1.91
SUMO3P55854 MTCO3P13-201ENST00000577757 781 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 RPS15AP11-201ENST00000594193 385 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 AC008739.2-201ENST00000597006 317 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 CYP2C61P-201ENST00000604072 290 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.15□□□□□ -1.91
SUMO3P55854 AC007792.1-201ENST00000623023 402 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 AC073073.2-201ENST00000609827 2578 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 MFSD8-236ENST00000641509 4050 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 AC007496.3-201ENST00000624987 3443 ntBASIC3.15□□□□□ -1.91
SUMO3P55854 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SUMO3P55854 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SUMO3P55854 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.14□□□□□ -1.91
SUMO3P55854 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
SUMO3P55854 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SUMO3P55854 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.14□□□□□ -1.91
SUMO3P55854 AL079305.1-201ENST00000623159 3008 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 Y_RNA.146-201ENST00000363549 102 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 RNU6-1141P-201ENST00000364520 107 ntBASIC3.14□□□□□ -1.91
SUMO3P55854 SNORD32A-201ENST00000364805 84 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms