Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUBP1P53384 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUBP1P53384 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUBP1P53384 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.5□□□□□ -1.53
NUBP1P53384 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUBP1P53384 Y_RNA.265-201ENST00000364677 108 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 SNORD24-201ENST00000383884 75 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 SDHCP2-201ENST00000398565 501 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 RPS26P48-201ENST00000491713 339 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 RNU6-948P-201ENST00000516374 107 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 Vault.1-201ENST00000516474 102 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 AP006289.1-201ENST00000538089 277 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 AC008739.2-201ENST00000597006 317 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 AC096577.2-201ENST00000611455 153 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 TCL6_3.1-201ENST00000619064 137 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.5□□□□□ -1.53
NUBP1P53384 AC000123.3-201ENST00000624029 4975 ntBASIC5.5□□□□□ -1.53
NUBP1P53384 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUBP1P53384 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.5□□□□□ -1.53
NUBP1P53384 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUBP1P53384 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUBP1P53384 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUBP1P53384 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUBP1P53384 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.49□□□□□ -1.53
NUBP1P53384 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.49□□□□□ -1.53
NUBP1P53384 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NUBP1P53384 MIR130A-201ENST00000385274 89 ntBASIC5.49□□□□□ -1.53
NUBP1P53384 AC073264.2-201ENST00000448886 166 ntBASIC5.49□□□□□ -1.53
NUBP1P53384 AC092754.1-201ENST00000472975 479 ntBASIC5.49□□□□□ -1.53
NUBP1P53384 RN7SL165P-201ENST00000477476 291 ntBASIC5.49□□□□□ -1.53
NUBP1P53384 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.49□□□□□ -1.53
NUBP1P53384 AC023141.12-201ENST00000512399 199 ntBASIC5.49□□□□□ -1.53
NUBP1P53384 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC5.49□□□□□ -1.53
NUBP1P53384 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC5.49□□□□□ -1.53
NUBP1P53384 USP8P1-201ENST00000494673 3183 ntBASIC5.49□□□□□ -1.53
NUBP1P53384 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
NUBP1P53384 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUBP1P53384 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUBP1P53384 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
NUBP1P53384 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
NUBP1P53384 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.48□□□□□ -1.53
NUBP1P53384 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUBP1P53384 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUBP1P53384 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUBP1P53384 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC5.48□□□□□ -1.53
NUBP1P53384 RNU6-888P-201ENST00000363010 101 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 RNU4-36P-201ENST00000364294 144 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 SNORD61-201ENST00000384252 73 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 AL009179.1-201ENST00000406085 265 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 RNA5SP296-201ENST00000410523 111 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 RPL18P10-201ENST00000425606 538 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 RPL30P4-201ENST00000429309 333 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 NDUFB4P8-201ENST00000435351 367 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 AC009127.1-201ENST00000467090 155 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 RN7SL354P-201ENST00000469282 294 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 AC005921.1-201ENST00000510589 286 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 RNU6-1270P-201ENST00000517128 108 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 AP001781.1-201ENST00000530977 207 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 MIR1254-2-201ENST00000579553 63 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 BMS1P21-201ENST00000634565 365 ntBASIC5.48□□□□□ -1.53
NUBP1P53384 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.48□□□□□ -1.53
NUBP1P53384 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUBP1P53384 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUBP1P53384 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
NUBP1P53384 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NUBP1P53384 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUBP1P53384 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.48□□□□□ -1.53
NUBP1P53384 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUBP1P53384 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NUBP1P53384 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NUBP1P53384 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NUBP1P53384 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NUBP1P53384 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUBP1P53384 Y_RNA.17-201ENST00000362433 111 ntBASIC5.47□□□□□ -1.53
NUBP1P53384 Y_RNA.242-201ENST00000364473 110 ntBASIC5.47□□□□□ -1.53
NUBP1P53384 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NUBP1P53384 MIR1255A-201ENST00000408338 113 ntBASIC5.47□□□□□ -1.53
NUBP1P53384 RNU2-49P-201ENST00000410666 184 ntBASIC5.47□□□□□ -1.53
NUBP1P53384 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.47□□□□□ -1.53
NUBP1P53384 RNU6-893P-201ENST00000458841 100 ntBASIC5.47□□□□□ -1.53
NUBP1P53384 RPL36AP48-201ENST00000485521 314 ntBASIC5.47□□□□□ -1.53
NUBP1P53384 RNY4P20-201ENST00000516678 93 ntBASIC5.47□□□□□ -1.53
NUBP1P53384 SCARNA15-202ENST00000516881 127 ntBASIC5.47□□□□□ -1.53
NUBP1P53384 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.47□□□□□ -1.53
NUBP1P53384 IGLL4P-201ENST00000614590 133 ntBASIC5.47□□□□□ -1.53
NUBP1P53384 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NUBP1P53384 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
NUBP1P53384 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NUBP1P53384 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUBP1P53384 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUBP1P53384 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NUBP1P53384 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUBP1P53384 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.47□□□□□ -1.53
NUBP1P53384 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NUBP1P53384 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
NUBP1P53384 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
NUBP1P53384 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.46□□□□□ -1.53
NUBP1P53384 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.46□□□□□ -1.53
NUBP1P53384 AL591135.1-201ENST00000401578 5914 ntBASIC5.46□□□□□ -1.53
NUBP1P53384 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms