Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.37□□□□□ -1.71
CHRNA4P43681 GMPSP1-201ENST00000514075 579 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 TRAV8-5-201ENST00000537369 341 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.37□□□□□ -1.71
CHRNA4P43681 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.37□□□□□ -1.71
CHRNA4P43681 MIR4716-201ENST00000579628 84 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 MIR3121-201ENST00000579680 77 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 DEFB117-201ENST00000602356 141 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 AC113403.1-201ENST00000604910 193 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 AP002826.1-201ENST00000608835 315 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 AL021997.2-201ENST00000615674 271 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHRNA4P43681 AL773545.4-201ENST00000637262 310 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.37□□□□□ -1.71
CHRNA4P43681 AL513478.4-201ENST00000641636 310 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CHRNA4P43681 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.37□□□□□ -1.71
CHRNA4P43681 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHRNA4P43681 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHRNA4P43681 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHRNA4P43681 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.37□□□□□ -1.71
CHRNA4P43681 CUL1P1-201ENST00000509510 2425 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CHRNA4P43681 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CHRNA4P43681 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHRNA4P43681 AC018529.3-201ENST00000624212 2254 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CHRNA4P43681 MIR450A1-201ENST00000362262 91 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 RNU6-235P-201ENST00000362644 107 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 SNORA72.2-201ENST00000365028 127 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 RNU6-407P-201ENST00000365280 104 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 RNU6-245P-201ENST00000384020 107 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 RNU6-146P-201ENST00000384602 108 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 AL031737.1-201ENST00000450125 223 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 ABCF2P2-201ENST00000450549 296 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 IFNWP4-201ENST00000453148 294 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.36□□□□□ -1.71
CHRNA4P43681 RN7SL98P-201ENST00000462271 300 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.36□□□□□ -1.71
CHRNA4P43681 RNA5SP360-201ENST00000516555 118 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 UBL5P4-201ENST00000562584 236 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 AL357075.2-201ENST00000614906 189 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 AL078604.3-201ENST00000615580 211 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 uc_338.13-201ENST00000618243 179 ntBASIC4.36□□□□□ -1.71
CHRNA4P43681 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.36□□□□□ -1.71
CHRNA4P43681 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHRNA4P43681 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CHRNA4P43681 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.36□□□□□ -1.71
CHRNA4P43681 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CHRNA4P43681 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHRNA4P43681 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
CHRNA4P43681 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CHRNA4P43681 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.35□□□□□ -1.71
CHRNA4P43681 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHRNA4P43681 RNA5SP175-201ENST00000364275 119 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 RNU6-294P-201ENST00000364999 102 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 RNU5E-7P-201ENST00000365290 117 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 SNORD116-21-201ENST00000384507 92 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 RNU6-763P-201ENST00000390865 106 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 AL513331.1-201ENST00000411908 397 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.35□□□□□ -1.71
CHRNA4P43681 EIF1AXP1-201ENST00000419267 435 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 SAGE2P-201ENST00000420011 2126 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 AC011998.1-201ENST00000433403 117 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 RPL23AP24-201ENST00000458203 385 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.35□□□□□ -1.71
CHRNA4P43681 ZNF192P1-203ENST00000565888 810 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 MIR6844-201ENST00000637122 62 ntBASIC4.35□□□□□ -1.71
CHRNA4P43681 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CHRNA4P43681 AL592182.3-201ENST00000642132 3304 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHRNA4P43681 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHRNA4P43681 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CHRNA4P43681 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHRNA4P43681 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CHRNA4P43681 RNU1-15P-201ENST00000353977 144 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 Y_RNA.35-201ENST00000362601 101 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 Y_RNA.101-201ENST00000363154 102 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHRNA4P43681 RNU6-643P-201ENST00000384018 107 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 U8.10-201ENST00000384260 133 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 MTHFD2P2-201ENST00000407725 247 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 SNORA11F-201ENST00000408237 128 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 RNU6-1199P-201ENST00000411249 104 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 AC068287.1-201ENST00000430283 295 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.34□□□□□ -1.71
CHRNA4P43681 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.34□□□□□ -1.71
CHRNA4P43681 U8.19-201ENST00000459095 133 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 AC015795.1-201ENST00000513669 327 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 RN7SKP122-201ENST00000515923 296 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.34□□□□□ -1.71
CHRNA4P43681 MIR4284-201ENST00000578924 81 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 AL161798.1-201ENST00000604630 131 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHRNA4P43681 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHRNA4P43681 AC140479.6-201ENST00000633535 357 ntBASIC4.34□□□□□ -1.71
CHRNA4P43681 AC116096.1-201ENST00000566804 2314 ntBASIC4.34□□□□□ -1.72
CHRNA4P43681 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms