Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
COL18A1P39060 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
COL18A1P39060 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.38□□□□□ -2.19
COL18A1P39060 AL445305.1-201ENST00000432577 575 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.38□□□□□ -2.19
COL18A1P39060 AL031313.1-201ENST00000448435 256 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 AP001324.2-201ENST00000461163 319 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.38□□□□□ -2.19
COL18A1P39060 AC018437.1-201ENST00000492214 406 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.38□□□□□ -2.19
COL18A1P39060 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.38□□□□□ -2.19
COL18A1P39060 HSBP1P1-201ENST00000555205 166 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.38□□□□□ -2.19
COL18A1P39060 AL391001.1-201ENST00000602747 715 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 AL109918.3-201ENST00000603072 338 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 AC005034.5-201ENST00000604219 466 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 SNORD114-21-201ENST00000606412 72 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 AL355472.4-201ENST00000610233 626 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.38□□□□□ -2.19
COL18A1P39060 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.38□□□□□ -2.19
COL18A1P39060 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
COL18A1P39060 Y_RNA.68-201ENST00000362881 102 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 RNU6-288P-201ENST00000363690 104 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 MIR301A-201ENST00000385261 86 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 NDUFS5P1-201ENST00000405668 289 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 RNU4-22P-201ENST00000411058 166 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.37□□□□□ -2.19
COL18A1P39060 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.37□□□□□ -2.19
COL18A1P39060 TIMM9P1-201ENST00000436122 256 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 NEFMP1-201ENST00000443423 1006 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.37□□□□□ -2.19
COL18A1P39060 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.37□□□□□ -2.19
COL18A1P39060 MTCYBP43-201ENST00000513621 740 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.37□□□□□ -2.19
COL18A1P39060 AP006587.4-201ENST00000526053 529 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 AP004247.1-201ENST00000531556 1289 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 CBX3P7-201ENST00000532876 502 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL18A1P39060 CYP3A137P-201ENST00000562436 69 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.37□□□□□ -2.19
COL18A1P39060 AC136618.2-201ENST00000575091 400 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 MIR4509-3-201ENST00000578671 94 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 MIR3973-201ENST00000579824 107 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 MIR4714-201ENST00000580728 77 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 MIR544B-201ENST00000582372 78 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 MIR4509-2-201ENST00000583920 94 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 AL031274.2-201ENST00000599419 203 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 VN1R82P-201ENST00000601481 356 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 AL158050.2-201ENST00000605336 568 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.37□□□□□ -2.19
COL18A1P39060 MIR6134-201ENST00000617606 109 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 MIR4509-1-201ENST00000618224 94 ntBASIC1.37□□□□□ -2.19
COL18A1P39060 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.37□□□□□ -2.19
COL18A1P39060 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
COL18A1P39060 RNU6-188P-201ENST00000364207 107 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.36□□□□□ -2.19
COL18A1P39060 MIR532-201ENST00000385025 91 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.36□□□□□ -2.19
COL18A1P39060 VPS26BP1-201ENST00000417155 755 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.36□□□□□ -2.19
COL18A1P39060 AL591704.1-201ENST00000432574 275 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AL353706.1-201ENST00000436728 494 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 MTCO2P20-201ENST00000437339 673 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 MTND3P1-201ENST00000441336 220 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AC112771.1-201ENST00000463581 102 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AC104685.1-201ENST00000502445 371 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 RNU6-572P-201ENST00000516724 80 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 SNORA31.23-201ENST00000517219 133 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.36□□□□□ -2.19
COL18A1P39060 AC096772.1-201ENST00000609146 564 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AC009233.1-201ENST00000616477 371 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.36□□□□□ -2.19
COL18A1P39060 RNU5E-1-201ENST00000362477 120 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 RNU5A-8P-201ENST00000364102 114 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 MIR95-201ENST00000385072 81 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.36□□□□□ -2.19
COL18A1P39060 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.36□□□□□ -2.19
COL18A1P39060 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.36□□□□□ -2.19
COL18A1P39060 RSU1P2-202ENST00000437884 485 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AL360221.1-201ENST00000445989 335 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 EXOSC3P1-201ENST00000448649 500 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 RPL23AP35-201ENST00000451906 501 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AC092001.1-201ENST00000453012 261 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 BTF3P15-201ENST00000455606 336 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AC134050.1-201ENST00000495088 933 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.36□□□□□ -2.19
COL18A1P39060 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
COL18A1P39060 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.36□□□□□ -2.19
COL18A1P39060 AC013470.4-201ENST00000619978 986 ntBASIC1.36□□□□□ -2.19
COL18A1P39060 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL18A1P39060 SNORA4.1-201ENST00000364263 144 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL18A1P39060 AC127391.1-201ENST00000411737 98 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 RPS29P23-201ENST00000458635 123 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 AC091965.2-201ENST00000512324 613 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 SNORA25.11-201ENST00000515935 105 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 ACA59.2-201ENST00000517061 156 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.35□□□□□ -2.19
COL18A1P39060 AC079598.5-201ENST00000547460 117 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 CR383656.8-201ENST00000549046 145 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms