Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.83□□□□□ -1.8
LTBRP36941 AC125232.2-201ENST00000592457 143 ntBASIC3.83□□□□□ -1.8
LTBRP36941 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBRP36941 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.83□□□□□ -1.8
LTBRP36941 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBRP36941 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LTBRP36941 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LTBRP36941 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LTBRP36941 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.83□□□□□ -1.8
LTBRP36941 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBRP36941 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LTBRP36941 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBRP36941 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LTBRP36941 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
LTBRP36941 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.82□□□□□ -1.8
LTBRP36941 AP000560.1-201ENST00000624150 1937 ntBASIC3.82□□□□□ -1.8
LTBRP36941 Y_RNA.288-201ENST00000364854 92 ntBASIC3.82□□□□□ -1.8
LTBRP36941 SNORD116-20-201ENST00000384529 92 ntBASIC3.82□□□□□ -1.8
LTBRP36941 FCF1P4-201ENST00000448326 183 ntBASIC3.82□□□□□ -1.8
LTBRP36941 AC125238.1-201ENST00000448842 249 ntBASIC3.82□□□□□ -1.8
LTBRP36941 AL513124.1-201ENST00000450410 614 ntBASIC3.82□□□□□ -1.8
LTBRP36941 AC104564.1-201ENST00000493028 407 ntBASIC3.82□□□□□ -1.8
LTBRP36941 RPS27AP10-201ENST00000496103 208 ntBASIC3.82□□□□□ -1.8
LTBRP36941 RNU6-897P-201ENST00000517135 105 ntBASIC3.82□□□□□ -1.8
LTBRP36941 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.82□□□□□ -1.8
LTBRP36941 MIR4325-201ENST00000583049 90 ntBASIC3.82□□□□□ -1.8
LTBRP36941 RPL23AP78-201ENST00000599928 470 ntBASIC3.82□□□□□ -1.8
LTBRP36941 MIR7851-201ENST00000610611 160 ntBASIC3.82□□□□□ -1.8
LTBRP36941 AC243829.7-201ENST00000633081 225 ntBASIC3.82□□□□□ -1.8
LTBRP36941 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LTBRP36941 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
LTBRP36941 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
LTBRP36941 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LTBRP36941 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LTBRP36941 AC233981.2-201ENST00000611524 1614 ntBASIC3.81□□□□□ -1.8
LTBRP36941 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LTBRP36941 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LTBRP36941 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LTBRP36941 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LTBRP36941 Y_RNA.19-201ENST00000362462 99 ntBASIC3.81□□□□□ -1.8
LTBRP36941 Y_RNA.64-201ENST00000362845 102 ntBASIC3.81□□□□□ -1.8
LTBRP36941 RNU6-770P-201ENST00000363929 105 ntBASIC3.81□□□□□ -1.8
LTBRP36941 RNU1-100P-201ENST00000365255 165 ntBASIC3.81□□□□□ -1.8
LTBRP36941 Y_RNA.358-201ENST00000365491 99 ntBASIC3.81□□□□□ -1.8
LTBRP36941 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LTBRP36941 SNORD17-201ENST00000390930 237 ntBASIC3.81□□□□□ -1.8
LTBRP36941 RNA5SP424-201ENST00000390988 115 ntBASIC3.81□□□□□ -1.8
LTBRP36941 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.81□□□□□ -1.8
LTBRP36941 RPL23AP48-201ENST00000406913 488 ntBASIC3.81□□□□□ -1.8
LTBRP36941 RNA5SP146-201ENST00000410743 123 ntBASIC3.81□□□□□ -1.8
LTBRP36941 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.81□□□□□ -1.8
LTBRP36941 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBRP36941 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBRP36941 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBRP36941 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBRP36941 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBRP36941 SNRPGP5-201ENST00000456003 220 ntBASIC3.81□□□□□ -1.8
LTBRP36941 RPS29P20-201ENST00000489592 171 ntBASIC3.81□□□□□ -1.8
LTBRP36941 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBRP36941 RNU1-61P-201ENST00000516107 151 ntBASIC3.81□□□□□ -1.8
LTBRP36941 AC034114.1-201ENST00000520293 285 ntBASIC3.81□□□□□ -1.8
LTBRP36941 IGLV3-26-201ENST00000520756 302 ntBASIC3.81□□□□□ -1.8
LTBRP36941 AC011602.1-201ENST00000546484 331 ntBASIC3.81□□□□□ -1.8
LTBRP36941 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.81□□□□□ -1.8
LTBRP36941 AL591424.2-201ENST00000617023 128 ntBASIC3.81□□□□□ -1.8
LTBRP36941 Z75746.1-201ENST00000440243 2080 ntBASIC3.81□□□□□ -1.8
LTBRP36941 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.81□□□□□ -1.8
LTBRP36941 CUL1P1-201ENST00000509510 2425 ntBASIC3.81□□□□□ -1.8
LTBRP36941 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.81□□□□□ -1.8
LTBRP36941 AC008725.1-201ENST00000605123 2263 ntBASIC3.81□□□□□ -1.8
LTBRP36941 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.81□□□□□ -1.8
LTBRP36941 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LTBRP36941 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LTBRP36941 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LTBRP36941 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.8□□□□□ -1.8
LTBRP36941 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LTBRP36941 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LTBRP36941 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.8□□□□□ -1.8
LTBRP36941 AC233263.6-201ENST00000631132 1963 ntBASIC3.8□□□□□ -1.8
LTBRP36941 AC007656.2-201ENST00000624902 4547 ntBASIC3.8□□□□□ -1.8
LTBRP36941 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LTBRP36941 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LTBRP36941 Y_RNA.26-201ENST00000362539 101 ntBASIC3.8□□□□□ -1.8
LTBRP36941 RNU1-76P-201ENST00000362903 159 ntBASIC3.8□□□□□ -1.8
LTBRP36941 RNA5SP374-201ENST00000362939 125 ntBASIC3.8□□□□□ -1.8
LTBRP36941 RNU6-270P-201ENST00000364131 105 ntBASIC3.8□□□□□ -1.8
LTBRP36941 U3.13-201ENST00000364804 214 ntBASIC3.8□□□□□ -1.8
LTBRP36941 RNU4-9P-201ENST00000364951 139 ntBASIC3.8□□□□□ -1.8
LTBRP36941 RNU6-806P-201ENST00000365147 105 ntBASIC3.8□□□□□ -1.8
LTBRP36941 RNU6-472P-201ENST00000384299 107 ntBASIC3.8□□□□□ -1.8
LTBRP36941 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LTBRP36941 MIR1302-6-201ENST00000408466 90 ntBASIC3.8□□□□□ -1.8
LTBRP36941 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.8□□□□□ -1.8
LTBRP36941 AC099548.1-201ENST00000421443 426 ntBASIC3.8□□□□□ -1.8
LTBRP36941 AC243964.1-201ENST00000441814 261 ntBASIC3.8□□□□□ -1.8
LTBRP36941 RPL26P9-201ENST00000457466 433 ntBASIC3.8□□□□□ -1.8
LTBRP36941 S100A11P2-201ENST00000467589 312 ntBASIC3.8□□□□□ -1.8
LTBRP36941 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.8□□□□□ -1.8
LTBRP36941 RNU6-1143P-201ENST00000516125 104 ntBASIC3.8□□□□□ -1.8
LTBRP36941 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms