Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC6A4P31645 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC6A4P31645 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC6A4P31645 AL513043.1-201ENST00000439124 535 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 Z75741.1-201ENST00000446793 314 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 FTH1P25-201ENST00000447665 469 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC6A4P31645 RPL12P25-201ENST00000455592 494 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 RPL9P9-202ENST00000466501 579 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 AC133134.1-201ENST00000466800 359 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 AC128713.1-201ENST00000471495 306 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC6A4P31645 RNU1-103P-201ENST00000516502 125 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 SCARNA16.2-201ENST00000516520 172 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 LINC00933-203ENST00000559812 219 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 AMZ2P1-203ENST00000565833 850 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 MIR4513-201ENST00000581077 86 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.45□□□□□ -1.86
SLC6A4P31645 AC009314.1-201ENST00000603871 304 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 AL162713.1-201ENST00000604480 262 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 AC116312.1-201ENST00000606841 314 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 MIR7112-201ENST00000616126 65 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC6A4P31645 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SLC6A4P31645 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC6A4P31645 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC6A4P31645 AF117829.1-206ENST00000621883 3802 ntBASIC3.45□□□□□ -1.86
SLC6A4P31645 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
SLC6A4P31645 MTND5P30-201ENST00000452896 1731 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.44□□□□□ -1.86
SLC6A4P31645 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SLC6A4P31645 RNU1-115P-201ENST00000365329 160 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 RNU1-73P-201ENST00000383971 164 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 Y_RNA.428-201ENST00000384078 102 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 RNU6-72P-201ENST00000384285 79 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 U3.19-201ENST00000390893 196 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 AL591034.2-201ENST00000402839 359 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 AP000567.1-201ENST00000406413 156 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 AL591034.1-201ENST00000407447 340 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 U3.37-201ENST00000408528 213 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 RNA5SP31-201ENST00000411144 127 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 MCFD2P1-201ENST00000417812 300 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC6A4P31645 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC6A4P31645 AC099799.1-201ENST00000439809 192 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 AC124916.1-201ENST00000444020 547 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC6A4P31645 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC6A4P31645 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.44□□□□□ -1.86
SLC6A4P31645 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC6A4P31645 AC022493.2-201ENST00000506122 481 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 PTP4A1P4-201ENST00000512479 322 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 SNORA25.10-201ENST00000515926 124 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 RNU6-377P-201ENST00000515965 102 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 RNA5SP384-201ENST00000516615 116 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 RNU6-1183P-201ENST00000517054 60 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 AP004607.1-201ENST00000524456 203 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 AC010186.2-204ENST00000537668 439 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 NACAP3-201ENST00000552100 481 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC6A4P31645 MIR4273-201ENST00000582824 84 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC6A4P31645 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SLC6A4P31645 Z83843.1-201ENST00000604070 3685 ntBASIC3.44□□□□□ -1.86
SLC6A4P31645 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
SLC6A4P31645 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC6A4P31645 RNU1-70P-201ENST00000362618 164 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 RNU6-778P-201ENST00000363269 103 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 RNU6-1059P-201ENST00000363752 98 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 RNU6-1032P-201ENST00000384100 107 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 RNU6-658P-201ENST00000384606 106 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 RNU6-331P-201ENST00000384724 107 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 RNU6-308P-201ENST00000390957 107 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 RPS4XP3-201ENST00000398541 413 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC6A4P31645 AC126124.2-201ENST00000413542 321 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC6A4P31645 HIGD1AP2-201ENST00000446367 280 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 BTF3P15-201ENST00000455606 336 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC6A4P31645 RNA5SP310-201ENST00000459084 116 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 RPL23AP62-201ENST00000463396 453 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 AC068781.1-201ENST00000488231 618 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 AK3P2-201ENST00000507976 429 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 Y_RNA.687-201ENST00000516558 91 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.43□□□□□ -1.86
SLC6A4P31645 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC6A4P31645 CYCSP39-201ENST00000565821 309 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC6A4P31645 VN1R107P-201ENST00000601784 209 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC6A4P31645 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SLC6A4P31645 U4.7-201ENST00000638126 106 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SLC6A4P31645 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC6A4P31645 MTND5P7-201ENST00000413558 1798 ntBASIC3.43□□□□□ -1.86
SLC6A4P31645 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SLC6A4P31645 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC6A4P31645 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms