Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.17□□□□□ -1.9
EPHA3P29320 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.17□□□□□ -1.9
EPHA3P29320 AL118496.2-201ENST00000448300 230 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.17□□□□□ -1.9
EPHA3P29320 SNORA84-201ENST00000459229 133 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 RN7SL542P-201ENST00000467147 294 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 HMGN2P13-201ENST00000476476 274 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 AC104619.4-201ENST00000510773 249 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.17□□□□□ -1.9
EPHA3P29320 RNU6-120P-201ENST00000516077 103 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.17□□□□□ -1.9
EPHA3P29320 CBX3P7-201ENST00000532876 502 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.17□□□□□ -1.9
EPHA3P29320 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.17□□□□□ -1.9
EPHA3P29320 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.17□□□□□ -1.9
EPHA3P29320 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.17□□□□□ -1.9
EPHA3P29320 SRGNP1-201ENST00000603392 451 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 AC004852.3-201ENST00000614131 326 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
EPHA3P29320 CDC27P3-201ENST00000635418 1910 ntBASIC3.17□□□□□ -1.9
EPHA3P29320 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
EPHA3P29320 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EPHA3P29320 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
EPHA3P29320 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
EPHA3P29320 RNU6-858P-201ENST00000362436 107 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 RNU6-527P-201ENST00000363425 104 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 Y_RNA.197-201ENST00000364004 102 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 Y_RNA.445-201ENST00000384168 102 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 RNU6-308P-201ENST00000390957 107 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 PTMAP2-201ENST00000397627 327 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 FTH1P15-201ENST00000406984 280 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 MIR548P-201ENST00000408336 84 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 AC023141.4-201ENST00000412031 328 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.16□□□□□ -1.9
EPHA3P29320 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.16□□□□□ -1.9
EPHA3P29320 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.16□□□□□ -1.9
EPHA3P29320 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.16□□□□□ -1.9
EPHA3P29320 USMG5P1-201ENST00000425964 177 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 MTND3P9-201ENST00000429526 346 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 SETP5-201ENST00000437270 562 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.16□□□□□ -1.9
EPHA3P29320 DAP3P1-201ENST00000441522 278 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.16□□□□□ -1.9
EPHA3P29320 AL133547.1-201ENST00000448546 220 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.16□□□□□ -1.9
EPHA3P29320 AL031183.1-201ENST00000457667 207 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 U8.21-201ENST00000459536 136 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 RPL23AP49-201ENST00000492925 468 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 AC093663.1-201ENST00000497190 394 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.16□□□□□ -1.9
EPHA3P29320 SCARNA15.1-201ENST00000516384 125 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.16□□□□□ -1.9
EPHA3P29320 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.16□□□□□ -1.9
EPHA3P29320 MIR3171-201ENST00000584270 74 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 AC024153.1-201ENST00000603103 365 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 AC005046.1-201ENST00000608515 625 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 U6.98-201ENST00000637157 84 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
EPHA3P29320 AL136164.4-201ENST00000625013 2135 ntBASIC3.16□□□□□ -1.9
EPHA3P29320 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
EPHA3P29320 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.15□□□□□ -1.91
EPHA3P29320 Y_RNA.48-201ENST00000362710 103 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 Y_RNA.128-201ENST00000363391 112 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 Y_RNA.326-201ENST00000365176 113 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
EPHA3P29320 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
EPHA3P29320 RNU6-1040P-201ENST00000383974 107 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 SNORD116-20-201ENST00000384529 92 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 SNORA75.6-201ENST00000391318 127 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 RNU6-1077P-201ENST00000410506 102 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.15□□□□□ -1.91
EPHA3P29320 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
EPHA3P29320 RBMY2UP-201ENST00000453474 324 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 Y_RNA.631-201ENST00000459607 101 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 FO393415.2-201ENST00000480085 343 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 AC116655.1-201ENST00000508324 901 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.15□□□□□ -1.91
EPHA3P29320 ACA59.1-201ENST00000515966 143 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 SNORA31.1-201ENST00000515993 133 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 SNORA31.5-201ENST00000516190 133 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 RNU6-612P-201ENST00000516909 102 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 AC006199.1-201ENST00000548728 219 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 AL442663.2-201ENST00000554385 511 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 SNRPGP17-201ENST00000603780 214 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 MIR3199-2-201ENST00000636243 86 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
EPHA3P29320 AC008264.2-201ENST00000610193 3731 ntBASIC3.15□□□□□ -1.91
EPHA3P29320 MTND4P27-201ENST00000450813 1354 ntBASIC3.14□□□□□ -1.91
EPHA3P29320 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
EPHA3P29320 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.14□□□□□ -1.91
EPHA3P29320 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.14□□□□□ -1.91
EPHA3P29320 Y_RNA.31-201ENST00000362574 102 ntBASIC3.14□□□□□ -1.91
EPHA3P29320 RNU6-105P-201ENST00000363909 104 ntBASIC3.14□□□□□ -1.91
EPHA3P29320 U8.8-201ENST00000365399 135 ntBASIC3.14□□□□□ -1.91
EPHA3P29320 MIR23B-201ENST00000384832 97 ntBASIC3.14□□□□□ -1.91
EPHA3P29320 MIR200C-201ENST00000384980 68 ntBASIC3.14□□□□□ -1.91
EPHA3P29320 MIR559-201ENST00000385188 96 ntBASIC3.14□□□□□ -1.91
EPHA3P29320 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.14□□□□□ -1.91
EPHA3P29320 RNU6-174P-201ENST00000410406 106 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms