Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ABCD3P28288 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ABCD3P28288 AC002543.1-201ENST00000299783 1954 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ABCD3P28288 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.82□□□□□ -1.96
ABCD3P28288 MIR22-201ENST00000362190 85 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 SNORD56.1-201ENST00000362913 68 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 U3.6-201ENST00000363622 211 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 Y_RNA.157-201ENST00000363638 102 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 SNORA54-201ENST00000384281 123 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 Y_RNA.530-201ENST00000384587 101 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 RN7SKP58-201ENST00000411010 305 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 RNA5SP492-201ENST00000411330 114 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 BMS1P22-201ENST00000414726 313 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.82□□□□□ -1.96
ABCD3P28288 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.82□□□□□ -1.96
ABCD3P28288 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.82□□□□□ -1.96
ABCD3P28288 RPL30P4-201ENST00000429309 333 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.82□□□□□ -1.96
ABCD3P28288 AL031274.1-201ENST00000450334 232 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 AL590639.1-201ENST00000456484 337 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 RPS29P25-201ENST00000481709 171 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 TRBVA-201ENST00000498804 316 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.82□□□□□ -1.96
ABCD3P28288 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.82□□□□□ -1.96
ABCD3P28288 RNU6-323P-201ENST00000521915 107 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.82□□□□□ -1.96
ABCD3P28288 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.82□□□□□ -1.96
ABCD3P28288 AL133241.1-201ENST00000556832 487 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.82□□□□□ -1.96
ABCD3P28288 AC090616.3-201ENST00000582184 217 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 BNIP3P16-201ENST00000589779 534 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
ABCD3P28288 AC024581.2-201ENST00000619986 252 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 MIR3662-201ENST00000637030 95 ntBASIC2.82□□□□□ -1.96
ABCD3P28288 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.82□□□□□ -1.96
ABCD3P28288 AC093831.2-201ENST00000624393 3427 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ABCD3P28288 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
ABCD3P28288 MIR422A-201ENST00000362286 90 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.81□□□□□ -1.96
ABCD3P28288 AL031121.1-201ENST00000406553 254 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AC009161.1-201ENST00000417306 376 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 USP9YP20-201ENST00000419224 558 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 NUP35P1-201ENST00000422734 947 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 MRPS10P2-201ENST00000431226 381 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.81□□□□□ -1.96
ABCD3P28288 NDUFA5P4-201ENST00000436704 385 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.81□□□□□ -1.96
ABCD3P28288 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.81□□□□□ -1.96
ABCD3P28288 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.81□□□□□ -1.96
ABCD3P28288 EEF1B2P7-201ENST00000451177 676 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.81□□□□□ -1.96
ABCD3P28288 AC096576.1-201ENST00000489014 359 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AC097462.2-201ENST00000504623 481 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.81□□□□□ -1.96
ABCD3P28288 RN7SKP272-201ENST00000516988 232 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.81□□□□□ -1.96
ABCD3P28288 AC007536.1-201ENST00000533382 349 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AP000763.2-201ENST00000540641 163 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.81□□□□□ -1.96
ABCD3P28288 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.81□□□□□ -1.96
ABCD3P28288 AC027176.1-201ENST00000560204 514 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.81□□□□□ -1.96
ABCD3P28288 MIR4325-201ENST00000583049 90 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.81□□□□□ -1.96
ABCD3P28288 MIR5692C1-201ENST00000585309 91 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AC073410.2-201ENST00000603240 332 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ABCD3P28288 AL121757.2-201ENST00000611223 313 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AC002553.4-201ENST00000616896 331 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 AC007792.1-201ENST00000623023 402 ntBASIC2.81□□□□□ -1.96
ABCD3P28288 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.8□□□□□ -1.96
ABCD3P28288 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ABCD3P28288 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
ABCD3P28288 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.8□□□□□ -1.96
ABCD3P28288 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.8□□□□□ -1.96
ABCD3P28288 AC073325.2-201ENST00000339545 159 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 SNORD113-7-201ENST00000363762 77 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 SNORA71.1-201ENST00000364523 117 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 MIR218-1-201ENST00000384999 110 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 RNU6-332P-201ENST00000391193 108 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 RPS29P13-201ENST00000402041 169 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.8□□□□□ -1.96
ABCD3P28288 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.8□□□□□ -1.96
ABCD3P28288 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.8□□□□□ -1.96
ABCD3P28288 AC007969.2-201ENST00000441891 191 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.8□□□□□ -1.96
ABCD3P28288 AL359672.1-201ENST00000442302 409 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 AC007547.1-201ENST00000462177 490 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 RN7SL20P-201ENST00000488827 297 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.8□□□□□ -1.96
ABCD3P28288 RNA5SP341-201ENST00000516261 117 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 AC109329.2-201ENST00000519658 482 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 AC090136.1-201ENST00000520009 240 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.8□□□□□ -1.96
ABCD3P28288 AP002404.1-201ENST00000532005 451 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.8□□□□□ -1.96
ABCD3P28288 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms