Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.68□□□□□ -1.98
BDNFP23560 AC091135.1-201ENST00000585943 307 ntBASIC2.68□□□□□ -1.98
BDNFP23560 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
BDNFP23560 AC008147.4-201ENST00000617570 1204 ntBASIC2.68□□□□□ -1.98
BDNFP23560 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.68□□□□□ -1.98
BDNFP23560 Z69720.2-201ENST00000624755 279 ntBASIC2.68□□□□□ -1.98
BDNFP23560 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.68□□□□□ -1.98
BDNFP23560 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
BDNFP23560 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.68□□□□□ -1.98
BDNFP23560 RNU6-1159P-201ENST00000362933 107 ntBASIC2.67□□□□□ -1.98
BDNFP23560 RNU1-23P-201ENST00000363361 144 ntBASIC2.67□□□□□ -1.98
BDNFP23560 Y_RNA.324-201ENST00000365165 102 ntBASIC2.67□□□□□ -1.98
BDNFP23560 RNU6-715P-201ENST00000365204 103 ntBASIC2.67□□□□□ -1.98
BDNFP23560 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
BDNFP23560 RNU6-1222P-201ENST00000384615 107 ntBASIC2.67□□□□□ -1.98
BDNFP23560 MIR144-201ENST00000384886 86 ntBASIC2.67□□□□□ -1.98
BDNFP23560 MIR17-201ENST00000385012 84 ntBASIC2.67□□□□□ -1.98
BDNFP23560 HMGN2P39-201ENST00000398005 273 ntBASIC2.67□□□□□ -1.98
BDNFP23560 AL591034.2-201ENST00000402839 359 ntBASIC2.67□□□□□ -1.98
BDNFP23560 RNU2-3P-201ENST00000410144 191 ntBASIC2.67□□□□□ -1.98
BDNFP23560 AC098826.1-201ENST00000433943 471 ntBASIC2.67□□□□□ -1.98
BDNFP23560 RPL39P29-201ENST00000447779 157 ntBASIC2.67□□□□□ -1.98
BDNFP23560 BET1P1-201ENST00000482276 359 ntBASIC2.67□□□□□ -1.98
BDNFP23560 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.67□□□□□ -1.98
BDNFP23560 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.67□□□□□ -1.98
BDNFP23560 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.67□□□□□ -1.98
BDNFP23560 AC117532.1-201ENST00000514638 323 ntBASIC2.67□□□□□ -1.98
BDNFP23560 AP000889.2-201ENST00000532684 490 ntBASIC2.67□□□□□ -1.98
BDNFP23560 ELOCP31-201ENST00000540463 467 ntBASIC2.67□□□□□ -1.98
BDNFP23560 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.67□□□□□ -1.98
BDNFP23560 AC012414.6-201ENST00000568241 401 ntBASIC2.67□□□□□ -1.98
BDNFP23560 AC007621.1-201ENST00000604544 437 ntBASIC2.67□□□□□ -1.98
BDNFP23560 AC073114.1-201ENST00000612027 490 ntBASIC2.67□□□□□ -1.98
BDNFP23560 SDR42E1P4-201ENST00000620894 481 ntBASIC2.67□□□□□ -1.98
BDNFP23560 U4.7-201ENST00000638126 106 ntBASIC2.67□□□□□ -1.98
BDNFP23560 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
BDNFP23560 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
BDNFP23560 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
BDNFP23560 MTND4P14-201ENST00000435799 1354 ntBASIC2.66□□□□□ -1.98
BDNFP23560 RNU6-611P-201ENST00000384276 104 ntBASIC2.66□□□□□ -1.98
BDNFP23560 RNU2-32P-201ENST00000411193 191 ntBASIC2.66□□□□□ -1.98
BDNFP23560 RN7SKP142-201ENST00000411236 328 ntBASIC2.66□□□□□ -1.98
BDNFP23560 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.66□□□□□ -1.98
BDNFP23560 RPL30P1-201ENST00000488676 339 ntBASIC2.66□□□□□ -1.98
BDNFP23560 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.66□□□□□ -1.98
BDNFP23560 AC105417.1-201ENST00000514691 285 ntBASIC2.66□□□□□ -1.98
BDNFP23560 RNU6-377P-201ENST00000515965 102 ntBASIC2.66□□□□□ -1.98
BDNFP23560 RNU6-667P-201ENST00000517186 102 ntBASIC2.66□□□□□ -1.98
BDNFP23560 AC107953.1-201ENST00000522216 297 ntBASIC2.66□□□□□ -1.98
BDNFP23560 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.66□□□□□ -1.98
BDNFP23560 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.66□□□□□ -1.98
BDNFP23560 AL391840.1-201ENST00000571144 367 ntBASIC2.66□□□□□ -1.98
BDNFP23560 MIR4703-201ENST00000577728 79 ntBASIC2.66□□□□□ -1.98
BDNFP23560 MIR4287-201ENST00000579398 78 ntBASIC2.66□□□□□ -1.98
BDNFP23560 MIR3670-2-201ENST00000582974 65 ntBASIC2.66□□□□□ -1.98
BDNFP23560 MIR3670-1-201ENST00000584160 65 ntBASIC2.66□□□□□ -1.98
BDNFP23560 MIR3670-3-201ENST00000584855 65 ntBASIC2.66□□□□□ -1.98
BDNFP23560 AC040904.1-201ENST00000590850 223 ntBASIC2.66□□□□□ -1.98
BDNFP23560 MIR3670-4-201ENST00000612260 65 ntBASIC2.66□□□□□ -1.98
BDNFP23560 AC009090.3-201ENST00000616553 565 ntBASIC2.66□□□□□ -1.98
BDNFP23560 U4.3-201ENST00000621047 82 ntBASIC2.66□□□□□ -1.98
BDNFP23560 AC233981.2-201ENST00000611524 1614 ntBASIC2.65□□□□□ -1.98
BDNFP23560 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
BDNFP23560 RNU6-181P-201ENST00000363225 107 ntBASIC2.65□□□□□ -1.99
BDNFP23560 XGY1-201ENST00000381172 446 ntBASIC2.65□□□□□ -1.99
BDNFP23560 RNU6-393P-201ENST00000384475 107 ntBASIC2.65□□□□□ -1.99
BDNFP23560 MIR518C-201ENST00000384822 101 ntBASIC2.65□□□□□ -1.99
BDNFP23560 RNU2-29P-201ENST00000410423 189 ntBASIC2.65□□□□□ -1.99
BDNFP23560 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.65□□□□□ -1.99
BDNFP23560 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.65□□□□□ -1.99
BDNFP23560 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.65□□□□□ -1.99
BDNFP23560 AC098826.2-201ENST00000452011 651 ntBASIC2.65□□□□□ -1.99
BDNFP23560 AL162395.1-201ENST00000457882 422 ntBASIC2.65□□□□□ -1.99
BDNFP23560 RPS29P15-201ENST00000458329 171 ntBASIC2.65□□□□□ -1.99
BDNFP23560 RPL30P12-201ENST00000474666 353 ntBASIC2.65□□□□□ -1.99
BDNFP23560 AC079382.1-201ENST00000493346 557 ntBASIC2.65□□□□□ -1.99
BDNFP23560 RNU6-445P-201ENST00000516949 107 ntBASIC2.65□□□□□ -1.99
BDNFP23560 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.65□□□□□ -1.99
BDNFP23560 AC022616.8-201ENST00000533569 253 ntBASIC2.65□□□□□ -1.99
BDNFP23560 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
BDNFP23560 Z82243.1-201ENST00000609432 473 ntBASIC2.65□□□□□ -1.99
BDNFP23560 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.65□□□□□ -1.99
BDNFP23560 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
BDNFP23560 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.64□□□□□ -1.99
BDNFP23560 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.64□□□□□ -1.99
BDNFP23560 CETN4P-201ENST00000432407 469 ntBASIC2.64□□□□□ -1.99
BDNFP23560 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.64□□□□□ -1.99
BDNFP23560 RNA5SP233-201ENST00000459153 113 ntBASIC2.64□□□□□ -1.99
BDNFP23560 AC018868.1-201ENST00000491307 315 ntBASIC2.64□□□□□ -1.99
BDNFP23560 HMGB1P35-201ENST00000503360 598 ntBASIC2.64□□□□□ -1.99
BDNFP23560 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.64□□□□□ -1.99
BDNFP23560 AC007834.2-201ENST00000536310 343 ntBASIC2.64□□□□□ -1.99
BDNFP23560 AC018630.3-201ENST00000542637 96 ntBASIC2.64□□□□□ -1.99
BDNFP23560 AL159153.1-201ENST00000619688 317 ntBASIC2.64□□□□□ -1.99
BDNFP23560 AC022418.1-201ENST00000624118 445 ntBASIC2.64□□□□□ -1.99
BDNFP23560 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.64□□□□□ -1.99
BDNFP23560 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.64□□□□□ -1.99
BDNFP23560 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
BDNFP23560 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
BDNFP23560 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms