Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL672296.1-201ENST00000427780 2158 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL6A2P12110 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.77□□□□□ -1.81
COL6A2P12110 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.76□□□□□ -1.81
COL6A2P12110 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL6A2P12110 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL6A2P12110 FAM35BP-202ENST00000497389 3337 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL6A2P12110 Y_RNA.512-201ENST00000384518 102 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 SNORA12.2-201ENST00000391040 156 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 MIR190B-201ENST00000401119 79 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 NDUFS5P4-201ENST00000412983 318 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 YPEL5P1-201ENST00000419731 367 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 ELOCP20-201ENST00000422460 345 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 AL513124.1-201ENST00000450410 614 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.76□□□□□ -1.81
COL6A2P12110 RPL23AP14-201ENST00000468281 468 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.76□□□□□ -1.81
COL6A2P12110 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.76□□□□□ -1.81
COL6A2P12110 AC091144.1-201ENST00000519573 138 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 RPS29P30-201ENST00000600975 111 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 MTND4LP5-201ENST00000605152 292 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 MIR492-201ENST00000638676 116 ntBASIC3.76□□□□□ -1.81
COL6A2P12110 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL6A2P12110 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL6A2P12110 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL6A2P12110 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
COL6A2P12110 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.75□□□□□ -1.81
COL6A2P12110 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL6A2P12110 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL6A2P12110 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
COL6A2P12110 Y_RNA.123-201ENST00000363338 102 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 RNU6-884P-201ENST00000363889 107 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 RNA5SP515-201ENST00000364570 118 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 RNU6-898P-201ENST00000365627 104 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 RNU6-472P-201ENST00000384299 107 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 SNORA51.11-201ENST00000384442 131 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 RNU6-1035P-201ENST00000384477 107 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 SNORA70C-201ENST00000384538 135 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 MIR23B-201ENST00000384832 97 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COL6A2P12110 RPS26P8-201ENST00000393490 348 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 AL356095.1-201ENST00000417217 199 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 TMEM167AP1-201ENST00000423409 219 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.75□□□□□ -1.81
COL6A2P12110 SNORA71B-202ENST00000439232 272 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 AC084357.1-201ENST00000473404 255 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.75□□□□□ -1.81
COL6A2P12110 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.75□□□□□ -1.81
COL6A2P12110 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.75□□□□□ -1.81
COL6A2P12110 RAC1P2-201ENST00000511164 579 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 RNU1-61P-201ENST00000516107 151 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL6A2P12110 CR383656.8-201ENST00000549046 145 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 SYF2P1-201ENST00000550658 413 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 AC025884.1-201ENST00000556034 378 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 AC007224.1-201ENST00000564410 144 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.75□□□□□ -1.81
COL6A2P12110 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.75□□□□□ -1.81
COL6A2P12110 AC125232.2-201ENST00000592457 143 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 AL390123.1-201ENST00000603216 237 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 RAC1P9-201ENST00000604990 392 ntBASIC3.75□□□□□ -1.81
COL6A2P12110 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
COL6A2P12110 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL6A2P12110 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.75□□□□□ -1.81
COL6A2P12110 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL6A2P12110 AC006504.1-201ENST00000562493 3666 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 AP000560.1-201ENST00000624150 1937 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL6A2P12110 RNU6-770P-201ENST00000363929 105 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 RNU1-64P-201ENST00000365443 163 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 Y_RNA.396-201ENST00000383949 103 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 RNU6-611P-201ENST00000384276 104 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 RNU6-713P-201ENST00000384761 107 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 MIR628-201ENST00000385229 95 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.74□□□□□ -1.81
COL6A2P12110 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.74□□□□□ -1.81
COL6A2P12110 AC074250.1-201ENST00000511117 192 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 RNU7-175P-201ENST00000515915 61 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 MIR2355-201ENST00000517199 87 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 AC034114.1-201ENST00000520293 285 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.74□□□□□ -1.81
COL6A2P12110 NACAP3-201ENST00000552100 481 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.74□□□□□ -1.81
COL6A2P12110 KLKP1-201ENST00000595979 403 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 AL356157.2-201ENST00000605122 111 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 SNORA62.6-201ENST00000606322 83 ntBASIC3.74□□□□□ -1.81
COL6A2P12110 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL6A2P12110 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL6A2P12110 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL6A2P12110 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.74□□□□□ -1.81
COL6A2P12110 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL6A2P12110 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL6A2P12110 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL6A2P12110 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
COL6A2P12110 Y_RNA.27-201ENST00000362540 103 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 RNU6-527P-201ENST00000363425 104 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms