| STAG3L3 | P0CL85 | AC012005.1-201 | ENST00000624575 | 75 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | TBC1D31-206 | ENST00000518805 | 2201 nt | TSL 2 BASIC | 1.45 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | ASPM-202 | ENST00000367408 | 3747 nt | TSL 1 (best) BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | SNORD48-201 | ENST00000364953 | 64 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL355143.1-201 | ENST00000407101 | 841 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNU2-20P-201 | ENST00000410425 | 191 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC007314.1-201 | ENST00000414538 | 565 nt | TSL 4 BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC019064.1-201 | ENST00000414796 | 499 nt | TSL 2 BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | PPP1R2P5-201 | ENST00000457256 | 603 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC087477.1-201 | ENST00000465747 | 340 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | BZW1P2-201 | ENST00000473537 | 826 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC004924.1-201 | ENST00000480160 | 781 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC079943.1-201 | ENST00000491909 | 466 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC112204.1-201 | ENST00000502591 | 103 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | HDAC2-AS2-206 | ENST00000517965 | 850 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC087318.1-201 | ENST00000536786 | 389 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AP002770.2-201 | ENST00000543613 | 532 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC009120.5-201 | ENST00000561669 | 475 nt | TSL 5 BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC002400.1-201 | ENST00000569310 | 726 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MIR4419B-201 | ENST00000577260 | 68 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | SNRPGP19-201 | ENST00000603826 | 189 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | PRR13P7-201 | ENST00000605538 | 430 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL139418.1-201 | ENST00000613613 | 177 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RMST_7.1-201 | ENST00000621935 | 268 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC243829.7-201 | ENST00000633081 | 225 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | HIF1A-212 | ENST00000557538 | 3468 nt | TSL 1 (best) BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | OR4C11-202 | ENST00000641580 | 2737 nt | APPRIS P1 BASIC | 1.44 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | HFM1-201 | ENST00000370425 | 4931 nt | APPRIS P1 TSL 1 (best) BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNA5SP387-201 | ENST00000364226 | 106 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNU6-253P-201 | ENST00000384730 | 105 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | SNORD115.1-201 | ENST00000391109 | 76 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL023284.1-201 | ENST00000403956 | 276 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL031779.1-201 | ENST00000415663 | 330 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC007969.2-201 | ENST00000441891 | 191 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | LINC01077-201 | ENST00000452288 | 413 nt | TSL 3 BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL122001.1-201 | ENST00000457027 | 370 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL354733.1-201 | ENST00000458016 | 476 nt | TSL 3 BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MTCO2P29-201 | ENST00000465212 | 189 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC132942.1-201 | ENST00000486753 | 483 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AP002075.1-201 | ENST00000505091 | 603 nt | TSL 3 BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MTCO3P9-201 | ENST00000506989 | 781 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC096711.1-201 | ENST00000510967 | 347 nt | TSL 5 BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | OCIAD1-AS1-201 | ENST00000513576 | 265 nt | TSL 3 BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | SNORA70.24-201 | ENST00000517233 | 118 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MTND4LP18-201 | ENST00000526864 | 291 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC115990.1-201 | ENST00000526957 | 301 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC087441.2-201 | ENST00000529141 | 262 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | ZNF84-205 | ENST00000535439 | 647 nt | TSL 5 BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC090680.2-201 | ENST00000550279 | 742 nt | TSL 3 BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | ZNF519P3-201 | ENST00000557158 | 1032 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | PSMA4-205 | ENST00000558281 | 773 nt | TSL 3 BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MIR3618-201 | ENST00000580330 | 88 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MIR7515HG-243 | ENST00000591400 | 1067 nt | TSL 5 BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL607023.1-201 | ENST00000620045 | 248 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC006927.4-201 | ENST00000639187 | 543 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | SERPINI2-202 | ENST00000461846 | 1514 nt | APPRIS P1 TSL 1 (best) BASIC | 1.43 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | OGN-202 | ENST00000375561 | 2743 nt | APPRIS P1 TSL 1 (best) BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNU6-78P-201 | ENST00000362897 | 107 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNU6-414P-201 | ENST00000363705 | 104 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNU6-83P-201 | ENST00000384568 | 112 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNU6-906P-201 | ENST00000384700 | 70 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MIR122-201 | ENST00000385044 | 85 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RSL24D1P4-201 | ENST00000400938 | 484 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNU6ATAC38P-201 | ENST00000408119 | 126 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNU4-53P-201 | ENST00000410828 | 140 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL445646.1-201 | ENST00000431784 | 216 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | IKZF2-209 | ENST00000442445 | 551 nt | TSL 5 BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC118469.1-201 | ENST00000442943 | 488 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL360271.2-201 | ENST00000447710 | 161 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC245517.4-201 | ENST00000448601 | 281 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNU1-131P-201 | ENST00000458943 | 161 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RPL9P6-201 | ENST00000492764 | 598 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC107393.1-201 | ENST00000512403 | 346 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNA5SP490-201 | ENST00000517141 | 136 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AP003034.1-201 | ENST00000534621 | 422 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL135746.1-201 | ENST00000554205 | 547 nt | TSL 3 BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | EIF4BP1-201 | ENST00000554881 | 351 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL512791.1-201 | ENST00000555853 | 300 nt | TSL 3 BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC009063.1-201 | ENST00000563342 | 702 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MIR5692A1-201 | ENST00000580523 | 69 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC025754.2-201 | ENST00000606491 | 432 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AP002371.2-201 | ENST00000624450 | 503 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | ETDC-201 | ENST00000635820 | 180 nt | APPRIS P1 BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MIR219B-201 | ENST00000637023 | 88 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MTND5P10-201 | ENST00000603719 | 1809 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | LINC02555-201 | ENST00000563933 | 1951 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | PPIL4-202 | ENST00000340881 | 1089 nt | TSL 1 (best) BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNU6-1222P-201 | ENST00000384615 | 107 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC068050.1-201 | ENST00000394891 | 380 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC114491.1-201 | ENST00000416095 | 246 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AL591043.1-201 | ENST00000432461 | 424 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC119618.1-201 | ENST00000434191 | 222 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | TRAPPC2P8-201 | ENST00000440676 | 396 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | TRAPPC2P3-201 | ENST00000443200 | 321 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | LINC00363-201 | ENST00000443228 | 210 nt | TSL 5 BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | AC130509.1-201 | ENST00000464158 | 433 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | WDR78-207 | ENST00000488333 | 613 nt | TSL 3 BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | RNA5SP445-201 | ENST00000515889 | 115 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| STAG3L3 | P0CL85 | CDKL3-207 | ENST00000521755 | 586 nt | TSL 5 BASIC | 1.41 | □□□□□ -2.18 | | |