Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEFMP07197 AL451062.2-201ENST00000427515 271 ntBASIC4.66□□□□□ -1.66
NEFMP07197 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEFMP07197 RN7SL594P-201ENST00000470590 287 ntBASIC4.66□□□□□ -1.66
NEFMP07197 RN7SL293P-201ENST00000481765 281 ntBASIC4.66□□□□□ -1.66
NEFMP07197 RPS15AP34-201ENST00000487776 387 ntBASIC4.66□□□□□ -1.66
NEFMP07197 GMPSP1-201ENST00000514075 579 ntBASIC4.66□□□□□ -1.66
NEFMP07197 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.66□□□□□ -1.66
NEFMP07197 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.66□□□□□ -1.66
NEFMP07197 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.66□□□□□ -1.66
NEFMP07197 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.66□□□□□ -1.66
NEFMP07197 AL390123.1-201ENST00000603216 237 ntBASIC4.66□□□□□ -1.66
NEFMP07197 SNORD39.4-201ENST00000620099 78 ntBASIC4.66□□□□□ -1.66
NEFMP07197 AC130454.1-201ENST00000622948 401 ntBASIC4.66□□□□□ -1.66
NEFMP07197 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NEFMP07197 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEFMP07197 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEFMP07197 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEFMP07197 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NEFMP07197 Y_RNA.48-201ENST00000362710 103 ntBASIC4.65□□□□□ -1.67
NEFMP07197 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.65□□□□□ -1.67
NEFMP07197 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NEFMP07197 RNU6-882P-201ENST00000391025 103 ntBASIC4.65□□□□□ -1.67
NEFMP07197 RNU6-1093P-201ENST00000391194 107 ntBASIC4.65□□□□□ -1.67
NEFMP07197 AL591034.2-201ENST00000402839 359 ntBASIC4.65□□□□□ -1.67
NEFMP07197 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.65□□□□□ -1.67
NEFMP07197 AL590664.1-201ENST00000448065 339 ntBASIC4.65□□□□□ -1.67
NEFMP07197 PRSS3P4-201ENST00000453323 162 ntBASIC4.65□□□□□ -1.67
NEFMP07197 AC113155.1-201ENST00000511141 769 ntBASIC4.65□□□□□ -1.67
NEFMP07197 MTND1P19-201ENST00000511780 315 ntBASIC4.65□□□□□ -1.67
NEFMP07197 RNU6-911P-201ENST00000516523 104 ntBASIC4.65□□□□□ -1.67
NEFMP07197 SNORA31.22-201ENST00000517204 135 ntBASIC4.65□□□□□ -1.67
NEFMP07197 AC126177.3-201ENST00000551839 688 ntBASIC4.65□□□□□ -1.67
NEFMP07197 AC004584.2-201ENST00000570407 410 ntBASIC4.65□□□□□ -1.67
NEFMP07197 MIR3690-201ENST00000580266 75 ntBASIC4.65□□□□□ -1.67
NEFMP07197 RPS29P30-201ENST00000600975 111 ntBASIC4.65□□□□□ -1.67
NEFMP07197 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.65□□□□□ -1.67
NEFMP07197 AC099778.2-201ENST00000610904 211 ntBASIC4.65□□□□□ -1.67
NEFMP07197 AL159153.1-201ENST00000619688 317 ntBASIC4.65□□□□□ -1.67
NEFMP07197 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.65□□□□□ -1.67
NEFMP07197 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
NEFMP07197 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.65□□□□□ -1.67
NEFMP07197 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
NEFMP07197 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
NEFMP07197 MTND5P6-201ENST00000422338 1798 ntBASIC4.64□□□□□ -1.67
NEFMP07197 Y_RNA.19-201ENST00000362462 99 ntBASIC4.64□□□□□ -1.67
NEFMP07197 Y_RNA.64-201ENST00000362845 102 ntBASIC4.64□□□□□ -1.67
NEFMP07197 RNU6-283P-201ENST00000364788 107 ntBASIC4.64□□□□□ -1.67
NEFMP07197 Y_RNA.324-201ENST00000365165 102 ntBASIC4.64□□□□□ -1.67
NEFMP07197 RNA5SP235-201ENST00000365411 114 ntBASIC4.64□□□□□ -1.67
NEFMP07197 AL513475.1-201ENST00000406602 315 ntBASIC4.64□□□□□ -1.67
NEFMP07197 RN7SKP53-201ENST00000411337 315 ntBASIC4.64□□□□□ -1.67
NEFMP07197 CYCSP33-201ENST00000414485 327 ntBASIC4.64□□□□□ -1.67
NEFMP07197 DBIP2-201ENST00000419076 262 ntBASIC4.64□□□□□ -1.67
NEFMP07197 MTND4LP30-201ENST00000454092 297 ntBASIC4.64□□□□□ -1.67
NEFMP07197 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.64□□□□□ -1.67
NEFMP07197 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.64□□□□□ -1.67
NEFMP07197 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.64□□□□□ -1.67
NEFMP07197 TRAV32-201ENST00000553993 340 ntBASIC4.64□□□□□ -1.67
NEFMP07197 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.64□□□□□ -1.67
NEFMP07197 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.64□□□□□ -1.67
NEFMP07197 AC090517.1-201ENST00000569307 266 ntBASIC4.64□□□□□ -1.67
NEFMP07197 AL512605.2-201ENST00000592972 256 ntBASIC4.64□□□□□ -1.67
NEFMP07197 AC006557.5-201ENST00000603126 811 ntBASIC4.64□□□□□ -1.67
NEFMP07197 RMST_4.1-201ENST00000616886 107 ntBASIC4.64□□□□□ -1.67
NEFMP07197 SDR42E1P4-201ENST00000620894 481 ntBASIC4.64□□□□□ -1.67
NEFMP07197 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.64□□□□□ -1.67
NEFMP07197 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.64□□□□□ -1.67
NEFMP07197 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEFMP07197 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEFMP07197 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.64□□□□□ -1.67
NEFMP07197 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEFMP07197 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
NEFMP07197 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.63□□□□□ -1.67
NEFMP07197 MFSD8-233ENST00000641482 4860 ntBASIC4.63□□□□□ -1.67
NEFMP07197 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.63□□□□□ -1.67
NEFMP07197 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NEFMP07197 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NEFMP07197 RNY3P11-201ENST00000364153 102 ntBASIC4.63□□□□□ -1.67
NEFMP07197 RNA5SP42-201ENST00000364278 115 ntBASIC4.63□□□□□ -1.67
NEFMP07197 RNU6-200P-201ENST00000364743 107 ntBASIC4.63□□□□□ -1.67
NEFMP07197 Y_RNA.477-201ENST00000384352 108 ntBASIC4.63□□□□□ -1.67
NEFMP07197 MIR628-201ENST00000385229 95 ntBASIC4.63□□□□□ -1.67
NEFMP07197 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.63□□□□□ -1.67
NEFMP07197 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.63□□□□□ -1.67
NEFMP07197 OR2AQ1P-201ENST00000451972 200 ntBASIC4.63□□□□□ -1.67
NEFMP07197 RPL21P104-201ENST00000464143 478 ntBASIC4.63□□□□□ -1.67
NEFMP07197 FO393415.2-201ENST00000480085 343 ntBASIC4.63□□□□□ -1.67
NEFMP07197 CPDP1-201ENST00000579660 283 ntBASIC4.63□□□□□ -1.67
NEFMP07197 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.63□□□□□ -1.67
NEFMP07197 AC034102.8-201ENST00000615146 484 ntBASIC4.63□□□□□ -1.67
NEFMP07197 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NEFMP07197 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
NEFMP07197 PWAR6-201ENST00000552334 4618 ntBASIC4.63□□□□□ -1.67
NEFMP07197 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.63□□□□□ -1.67
NEFMP07197 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEFMP07197 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEFMP07197 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEFMP07197 RNA5SP72-201ENST00000364442 117 ntBASIC4.62□□□□□ -1.67
NEFMP07197 RNU6-1179P-201ENST00000384667 107 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms