Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 Y_RNA.771-201ENST00000598668 102 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 AL590240.4-201ENST00000616908 390 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 Y_RNA.789-201ENST00000622480 102 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFAP04085 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFAP04085 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFAP04085 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFAP04085 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFAP04085 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PDGFAP04085 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PDGFAP04085 AC135776.4-201ENST00000624300 1904 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFAP04085 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFAP04085 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFAP04085 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
PDGFAP04085 AL157777.2-201ENST00000258070 137 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFAP04085 RNA5SP197-201ENST00000363357 119 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 RNU6-682P-201ENST00000363843 106 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 RNA5SP513-201ENST00000364648 118 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 RNU4-56P-201ENST00000364700 142 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 SNORA72.2-201ENST00000365028 127 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 Y_RNA.383-201ENST00000383855 97 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 PTMAP5-201ENST00000393073 333 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 EI24P2-201ENST00000397776 1076 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 AL356387.2-201ENST00000422272 243 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 NUTF2P3-201ENST00000448540 384 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 AC005042.3-201ENST00000453230 174 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 Y_RNA.638-201ENST00000459374 113 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 RN7SL303P-201ENST00000469773 251 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 AC074133.1-201ENST00000515696 183 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 RNA5SP154-201ENST00000516193 111 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 Y_RNA.703-201ENST00000516846 111 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFAP04085 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFAP04085 HMGN2P15-201ENST00000585707 270 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 KLKP1-201ENST00000595979 403 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFAP04085 AL445567.2-201ENST00000618935 498 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 AP005019.3-201ENST00000620418 560 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 AC048347.1-201ENST00000624621 427 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFAP04085 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFAP04085 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFAP04085 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PDGFAP04085 AC011266.1-201ENST00000624119 3569 ntBASIC4.27□□□□□ -1.73
PDGFAP04085 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFAP04085 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFAP04085 AL109809.4-201ENST00000603520 2185 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PDGFAP04085 Y_RNA.179-201ENST00000363844 90 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 SNORA71.2-201ENST00000364941 134 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 Y_RNA.418-201ENST00000384029 102 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 SNORA70C-201ENST00000384538 135 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 AL591034.1-201ENST00000407447 340 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.26□□□□□ -1.73
PDGFAP04085 CKS1BP6-201ENST00000424932 240 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 AL591419.1-201ENST00000427423 339 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 RPS29P17-201ENST00000430795 166 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 UQCRBP2-201ENST00000447827 297 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 MRPS10P1-201ENST00000448483 130 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 AC107626.1-201ENST00000471084 183 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 AC090525.1-201ENST00000479116 478 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 AC091167.1-201ENST00000492017 396 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 RPL7P47-201ENST00000497299 556 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 SNORA31.9-201ENST00000516429 84 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 RNU6-861P-201ENST00000516745 106 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 SNORA31.16-201ENST00000516773 139 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 Y_RNA.719-201ENST00000517156 106 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFAP04085 CYCSP40-201ENST00000575927 294 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 MIR3136-201ENST00000583498 78 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 AC010620.2-201ENST00000600135 313 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 AL356575.1-201ENST00000603008 283 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 AL078605.1-201ENST00000603529 500 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 AL357075.2-201ENST00000614906 189 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 MIR6076-201ENST00000617521 113 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.26□□□□□ -1.73
PDGFAP04085 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFAP04085 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFAP04085 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
PDGFAP04085 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
PDGFAP04085 MTND5P35-201ENST00000557537 1720 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 ZNF204P-201ENST00000416749 2397 ntBASIC4.26□□□□□ -1.73
PDGFAP04085 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFAP04085 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.25□□□□□ -1.73
PDGFAP04085 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.25□□□□□ -1.73
PDGFAP04085 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
PDGFAP04085 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFAP04085 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFAP04085 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFAP04085 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFAP04085 RNU6-245P-201ENST00000384020 107 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 RNU6-213P-201ENST00000384051 104 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 RNU6-1289P-201ENST00000384431 106 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 SNORA19-201ENST00000384737 128 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 MIR23B-201ENST00000384832 97 ntBASIC4.25□□□□□ -1.73
PDGFAP04085 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PDGFAP04085 AL590762.2-201ENST00000395798 571 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 448.5 ms