Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CDR1-202ENST00000625883 1485 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
COL1A1P02452 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
COL1A1P02452 NACAP2-201ENST00000318548 624 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 RNU5B-1-201ENST00000363286 116 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 RNU6-105P-201ENST00000363909 104 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 RNU6-354P-201ENST00000383862 107 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 RNU6-610P-201ENST00000384264 107 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 RNU6-1207P-201ENST00000384343 107 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 MIR508-201ENST00000384857 115 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
COL1A1P02452 SNORD65.1-201ENST00000390889 71 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 AL591034.2-201ENST00000402839 359 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 RNU2-36P-201ENST00000410361 191 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 RN7SKP61-201ENST00000410642 295 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.88□□□□□ -2.27
COL1A1P02452 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.88□□□□□ -2.27
COL1A1P02452 AC112771.1-201ENST00000463581 102 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
COL1A1P02452 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.88□□□□□ -2.27
COL1A1P02452 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.88□□□□□ -2.27
COL1A1P02452 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.88□□□□□ -2.27
COL1A1P02452 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.88□□□□□ -2.27
COL1A1P02452 AC110760.3-202ENST00000515177 371 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 RNU6-583P-201ENST00000516012 92 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 RNU6-927P-201ENST00000516199 100 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.88□□□□□ -2.27
COL1A1P02452 MTCO3P15-201ENST00000526563 574 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 MTCO2P15-201ENST00000532655 656 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 AC005832.3-201ENST00000537929 631 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 AF038458.1-201ENST00000588406 262 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 AC087045.1-201ENST00000605856 382 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
COL1A1P02452 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
COL1A1P02452 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
COL1A1P02452 Y_RNA.234-201ENST00000364409 97 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 SNORA25.8-201ENST00000364831 128 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 RNU6-432P-201ENST00000384196 109 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 RNU6-1122P-201ENST00000384449 107 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 RNU6-114P-201ENST00000384704 105 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 RNU6-952P-201ENST00000391164 108 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 RNA5SP501-201ENST00000410990 112 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.87□□□□□ -2.27
COL1A1P02452 AL353621.1-201ENST00000418219 243 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 BTF3L4P3-201ENST00000418879 476 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 BX119904.4-201ENST00000424402 301 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.87□□□□□ -2.27
COL1A1P02452 MTCO1P3-201ENST00000429327 192 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
COL1A1P02452 AC000111.3-201ENST00000433478 193 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 MTND1P28-201ENST00000435623 950 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.87□□□□□ -2.27
COL1A1P02452 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.87□□□□□ -2.27
COL1A1P02452 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.87□□□□□ -2.27
COL1A1P02452 HMGB1P28-201ENST00000507778 552 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 AC008628.1-201ENST00000508663 265 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.87□□□□□ -2.27
COL1A1P02452 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
COL1A1P02452 MTND5P13-201ENST00000513046 1079 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.87□□□□□ -2.27
COL1A1P02452 AC027338.1-201ENST00000514840 825 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 RNU6-390P-201ENST00000516259 103 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 RNU6-703P-201ENST00000516946 107 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 RNU6-902P-201ENST00000517212 91 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 AC004812.1-201ENST00000540773 146 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 HIGD1AP17-201ENST00000554576 276 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.87□□□□□ -2.27
COL1A1P02452 TUG1_2.1-201ENST00000614234 87 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 AC231657.1-201ENST00000624313 397 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 AC091965.5-201ENST00000624785 342 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.87□□□□□ -2.27
COL1A1P02452 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
COL1A1P02452 AC100821.1-201ENST00000523153 2479 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 AL079343.1-201ENST00000572358 1771 ntBASIC0.87□□□□□ -2.27
COL1A1P02452 SNORA22-201ENST00000383907 134 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 RNU6-207P-201ENST00000384137 107 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 SNORA22C-201ENST00000384614 134 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
COL1A1P02452 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.86□□□□□ -2.27
COL1A1P02452 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.86□□□□□ -2.27
COL1A1P02452 RPL30P6-201ENST00000475925 342 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC117454.1-201ENST00000491120 168 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC026414.1-201ENST00000504046 698 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.86□□□□□ -2.27
COL1A1P02452 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.86□□□□□ -2.27
COL1A1P02452 AC104417.1-201ENST00000523974 751 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.86□□□□□ -2.27
COL1A1P02452 CYCSP27-201ENST00000527643 293 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 OR5B19P-201ENST00000531766 928 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.86□□□□□ -2.27
COL1A1P02452 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.86□□□□□ -2.27
COL1A1P02452 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.86□□□□□ -2.27
COL1A1P02452 AL353997.4-201ENST00000586196 166 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.86□□□□□ -2.27
COL1A1P02452 BBIP1P1-201ENST00000602999 279 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 CYP2C61P-201ENST00000604072 290 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.86□□□□□ -2.27
COL1A1P02452 AC078880.5-201ENST00000617845 421 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AL445264.1-201ENST00000621719 171 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC093875.1-201ENST00000623688 504 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms