Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RN7SL442P-201ENST00000473804 320 ntBASIC3.81□□□□□ -1.8
CLSTN1O94985 RPL30P12-201ENST00000474666 353 ntBASIC3.81□□□□□ -1.8
CLSTN1O94985 RPS27P27-201ENST00000498779 255 ntBASIC3.81□□□□□ -1.8
CLSTN1O94985 AIG1P1-201ENST00000503376 148 ntBASIC3.81□□□□□ -1.8
CLSTN1O94985 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLSTN1O94985 RN7SKP24-201ENST00000515888 284 ntBASIC3.81□□□□□ -1.8
CLSTN1O94985 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.81□□□□□ -1.8
CLSTN1O94985 RNU1-30P-201ENST00000606575 163 ntBASIC3.81□□□□□ -1.8
CLSTN1O94985 AC005046.1-201ENST00000608515 625 ntBASIC3.81□□□□□ -1.8
CLSTN1O94985 AC012442.3-202ENST00000636742 206 ntBASIC3.81□□□□□ -1.8
CLSTN1O94985 AC241585.2-209ENST00000638217 143 ntBASIC3.81□□□□□ -1.8
CLSTN1O94985 AC009487.2-201ENST00000420969 6821 ntBASIC3.81□□□□□ -1.8
CLSTN1O94985 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.81□□□□□ -1.8
CLSTN1O94985 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.8□□□□□ -1.8
CLSTN1O94985 MTND4P23-201ENST00000447723 1363 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 MIR544A-201ENST00000384855 91 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 U3.26-201ENST00000391236 204 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 SNORA48.7-201ENST00000391302 135 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 RPS29P13-201ENST00000402041 169 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 MIR548K-201ENST00000408406 116 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.8□□□□□ -1.8
CLSTN1O94985 NUP35P1-201ENST00000422734 947 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.8□□□□□ -1.8
CLSTN1O94985 AC007969.2-201ENST00000441891 191 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 AC093019.1-201ENST00000443135 252 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 MTND1P17-201ENST00000448961 204 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 AC112771.1-201ENST00000463581 102 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 MTND5P5-201ENST00000503764 376 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 SNORA31.18-201ENST00000517043 134 ntBASIC3.8□□□□□ -1.8
CLSTN1O94985 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.8□□□□□ -1.8
CLSTN1O94985 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.8□□□□□ -1.8
CLSTN1O94985 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.8□□□□□ -1.8
CLSTN1O94985 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLSTN1O94985 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLSTN1O94985 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CLSTN1O94985 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CLSTN1O94985 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.79□□□□□ -1.8
CLSTN1O94985 Y_RNA.356-201ENST00000365475 113 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 RNU6-306P-201ENST00000384617 107 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 U3.39-201ENST00000408569 239 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 RNU6-1328P-201ENST00000410938 106 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.79□□□□□ -1.8
CLSTN1O94985 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.79□□□□□ -1.8
CLSTN1O94985 AC093578.1-201ENST00000415219 368 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 AL139396.1-201ENST00000421137 167 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 AP000907.1-201ENST00000428428 510 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 AL645568.3-201ENST00000433683 316 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 RPS3AP52-201ENST00000435639 297 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.79□□□□□ -1.8
CLSTN1O94985 RN7SL283P-201ENST00000489055 303 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.79□□□□□ -1.8
CLSTN1O94985 AC026403.1-201ENST00000518938 295 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 AC105029.1-201ENST00000520250 669 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.79□□□□□ -1.8
CLSTN1O94985 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.79□□□□□ -1.8
CLSTN1O94985 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.79□□□□□ -1.8
CLSTN1O94985 MIR3158-1-201ENST00000583596 81 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.79□□□□□ -1.8
CLSTN1O94985 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.79□□□□□ -1.8
CLSTN1O94985 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.79□□□□□ -1.8
CLSTN1O94985 MIR6128-201ENST00000615528 109 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 AC135776.4-201ENST00000624300 1904 ntBASIC3.79□□□□□ -1.8
CLSTN1O94985 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLSTN1O94985 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLSTN1O94985 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.78□□□□□ -1.8
CLSTN1O94985 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLSTN1O94985 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CLSTN1O94985 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLSTN1O94985 RNA5SP50-201ENST00000363731 107 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 SNORA68.1-201ENST00000364537 132 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 Y_RNA.339-201ENST00000365325 102 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 RNU6-622P-201ENST00000384272 103 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 Y_RNA.529-201ENST00000384586 119 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 AC022028.1-201ENST00000412054 408 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 AC074085.1-201ENST00000413598 418 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 AC138623.1-201ENST00000418060 216 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 FABP5P14-201ENST00000437273 393 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.78□□□□□ -1.8
CLSTN1O94985 AC146507.2-201ENST00000460608 476 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 SNRPGP7-201ENST00000469016 106 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 RPL36AP48-201ENST00000485521 314 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.78□□□□□ -1.8
CLSTN1O94985 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.78□□□□□ -1.8
CLSTN1O94985 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.78□□□□□ -1.8
CLSTN1O94985 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.78□□□□□ -1.8
CLSTN1O94985 RPS15AP11-201ENST00000594193 385 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.78□□□□□ -1.8
CLSTN1O94985 MIR3976-201ENST00000606807 139 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 uc_338.14-201ENST00000613162 166 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 AC009093.8-201ENST00000641769 292 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.78□□□□□ -1.8
CLSTN1O94985 AL513302.2-201ENST00000562313 1842 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 MTCO1P12-201ENST00000414273 1543 ntBASIC3.78□□□□□ -1.8
CLSTN1O94985 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLSTN1O94985 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
CLSTN1O94985 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CLSTN1O94985 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.77□□□□□ -1.81
CLSTN1O94985 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.77□□□□□ -1.81
CLSTN1O94985 RNA5SP383-201ENST00000362934 120 ntBASIC3.77□□□□□ -1.81
CLSTN1O94985 RNU6-790P-201ENST00000384479 105 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms