Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CPNE3O75131 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.23□□□□□ -1.73
CPNE3O75131 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CPNE3O75131 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.23□□□□□ -1.73
CPNE3O75131 AC004944.1-201ENST00000517807 3059 ntBASIC4.23□□□□□ -1.73
CPNE3O75131 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.23□□□□□ -1.73
CPNE3O75131 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.22□□□□□ -1.73
CPNE3O75131 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.22□□□□□ -1.73
CPNE3O75131 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CPNE3O75131 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CPNE3O75131 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
CPNE3O75131 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CPNE3O75131 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.22□□□□□ -1.73
CPNE3O75131 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CPNE3O75131 RNU6-1285P-201ENST00000363480 105 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CPNE3O75131 RNU6-20P-201ENST00000384106 107 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 Y_RNA.569-201ENST00000384749 103 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 MIR548M-201ENST00000408260 86 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 RNU2-37P-201ENST00000410695 177 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 AC012306.1-201ENST00000423267 114 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.22□□□□□ -1.73
CPNE3O75131 RPL23AP65-201ENST00000475608 468 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 RNA5SP54-201ENST00000516951 92 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 AL137100.2-201ENST00000555786 315 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CPNE3O75131 AC091178.1-203ENST00000584586 279 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 MIR3138-201ENST00000585238 82 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 AC002076.2-201ENST00000617362 122 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 uc_338.13-201ENST00000618243 179 ntBASIC4.22□□□□□ -1.73
CPNE3O75131 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CPNE3O75131 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.22□□□□□ -1.73
CPNE3O75131 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.22□□□□□ -1.73
CPNE3O75131 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.22□□□□□ -1.73
CPNE3O75131 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.22□□□□□ -1.73
CPNE3O75131 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.22□□□□□ -1.73
CPNE3O75131 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CPNE3O75131 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CPNE3O75131 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CPNE3O75131 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CPNE3O75131 Y_RNA.180-201ENST00000363867 113 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 Y_RNA.199-201ENST00000364014 102 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 SNORA70C-201ENST00000384538 135 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 SNORA26.3-201ENST00000391119 136 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 RNA5SP104-201ENST00000410989 118 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 Y_RNA.793-201ENST00000411222 111 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 RPL23AP26-201ENST00000412728 464 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 AC019205.3-201ENST00000424573 156 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 OR4C10P-201ENST00000434991 931 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.21□□□□□ -1.74
CPNE3O75131 NDUFB4P10-201ENST00000452541 359 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 RPS26P28-201ENST00000470806 348 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 UQCRHP4-201ENST00000471686 272 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 RPL30P14-201ENST00000482744 348 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 AC020593.1-201ENST00000507399 299 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 SNORA40.9-201ENST00000515895 93 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 MRPL49P2-201ENST00000521066 465 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.21□□□□□ -1.74
CPNE3O75131 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.21□□□□□ -1.74
CPNE3O75131 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CPNE3O75131 AC068724.3-201ENST00000625906 87 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 AC140479.6-201ENST00000633535 357 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.21□□□□□ -1.74
CPNE3O75131 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CPNE3O75131 AF117829.1-206ENST00000621883 3802 ntBASIC4.21□□□□□ -1.74
CPNE3O75131 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CPNE3O75131 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CPNE3O75131 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CPNE3O75131 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CPNE3O75131 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CPNE3O75131 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CPNE3O75131 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CPNE3O75131 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CPNE3O75131 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CPNE3O75131 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CPNE3O75131 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CPNE3O75131 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CPNE3O75131 RNU6-873P-201ENST00000363833 107 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 RNU6-961P-201ENST00000363893 105 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 RNA5SP366-201ENST00000365454 123 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.2□□□□□ -1.74
CPNE3O75131 Y_RNA.570-201ENST00000384750 101 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 MIR93-201ENST00000385024 80 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 MIR3065-201ENST00000390137 79 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 AL390729.2-201ENST00000416137 156 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.2□□□□□ -1.74
CPNE3O75131 NUTF2P3-201ENST00000448540 384 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 PARP4P3-201ENST00000510265 317 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 SNORA31.9-201ENST00000516429 84 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 SNORA31.16-201ENST00000516773 139 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.2□□□□□ -1.74
CPNE3O75131 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.2□□□□□ -1.74
CPNE3O75131 AL020997.2-201ENST00000602607 184 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 AL445567.2-201ENST00000618935 498 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.2□□□□□ -1.74
CPNE3O75131 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.2□□□□□ -1.74
CPNE3O75131 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CPNE3O75131 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CPNE3O75131 AC073073.2-201ENST00000609827 2578 ntBASIC4.2□□□□□ -1.74
CPNE3O75131 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms