Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 SNORA36C-201ENST00000384289 132 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 Y_RNA.623-201ENST00000411128 95 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 RNU5E-9P-201ENST00000411164 104 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 AL358453.1-201ENST00000422522 250 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM13O60858 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM13O60858 AC034236.1-201ENST00000469891 373 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 UQCRHP4-201ENST00000471686 272 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 AL132838.2-201ENST00000492041 314 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 SUMO2P6-201ENST00000505273 288 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 Y_RNA.706-201ENST00000516933 99 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 TOMM20P2-201ENST00000540082 421 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM13O60858 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM13O60858 AC005255.1-201ENST00000593748 216 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 SNORD113-5-201ENST00000607261 78 ntBASIC3.82□□□□□ -1.8
TRIM13O60858 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM13O60858 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM13O60858 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM13O60858 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM13O60858 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRIM13O60858 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
TRIM13O60858 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TRIM13O60858 RNU6-1301P-201ENST00000362724 104 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 SNORA58B-201ENST00000364259 136 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 Y_RNA.286-201ENST00000364813 102 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 Y_RNA.353-201ENST00000365440 108 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 RNU6-827P-201ENST00000365553 106 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 Y_RNA.586-201ENST00000391146 98 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 AC016397.1-201ENST00000412463 242 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 SNORD56-201ENST00000413522 71 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 AC079780.1-201ENST00000428259 207 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM13O60858 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM13O60858 AC010285.1-201ENST00000470580 392 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 HSPE1P6-201ENST00000479457 291 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 RN7SKP83-201ENST00000516512 178 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 RN7SKP209-201ENST00000516888 304 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 RNA5SP179-201ENST00000517284 121 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.81□□□□□ -1.8
TRIM13O60858 YPEL5P3-201ENST00000547227 352 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 TRAV37-201ENST00000553906 342 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM13O60858 AC090617.3-201ENST00000573670 475 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 MIR4308-201ENST00000580634 81 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 IPO5P1-202ENST00000600039 287 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 AC091167.4-201ENST00000605079 184 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 AC011944.2-201ENST00000624440 683 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM13O60858 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRIM13O60858 ZNF826P-207ENST00000622273 1910 ntBASIC3.81□□□□□ -1.8
TRIM13O60858 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM13O60858 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
TRIM13O60858 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM13O60858 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM13O60858 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM13O60858 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM13O60858 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM13O60858 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM13O60858 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM13O60858 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM13O60858 SNORA25.1-201ENST00000362326 128 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-37P-201ENST00000362692 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU5A-1-201ENST00000362698 116 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-11P-201ENST00000364234 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNA5SP205-201ENST00000364653 136 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 Y_RNA.272-201ENST00000364696 102 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-7-201ENST00000364784 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-8-201ENST00000365467 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-25P-201ENST00000383873 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-1-201ENST00000383898 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-44P-201ENST00000384045 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-36P-201ENST00000384172 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-1181P-201ENST00000384191 106 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-4P-201ENST00000384205 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-5P-201ENST00000384238 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-3P-201ENST00000384314 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-16P-201ENST00000384385 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-15P-201ENST00000384534 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-658P-201ENST00000384606 106 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-2-201ENST00000384627 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-29P-201ENST00000384637 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 Y_RNA.569-201ENST00000384749 103 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU6-9-201ENST00000384776 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 U3.22-201ENST00000391120 215 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 AL117339.3-201ENST00000418733 162 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 AC005002.2-201ENST00000438228 269 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 SNORD2.1-201ENST00000458762 69 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RN7SL738P-201ENST00000470264 297 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM13O60858 AC093840.1-201ENST00000511599 336 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNU7-175P-201ENST00000515915 61 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 RNY3P16-201ENST00000516338 101 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM13O60858 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.8□□□□□ -1.8
TRIM13O60858 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM13O60858 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM13O60858 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM13O60858 AC234771.5-201ENST00000600161 514 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms