Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC005300.1-201ENST00000428401 373 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 GOT2P5-201ENST00000433995 546 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 RPL26P9-201ENST00000457466 433 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 SNORD125-201ENST00000459538 96 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 RPL31P41-201ENST00000477967 372 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 AC006517.1-201ENST00000480485 328 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 RN7SL810P-201ENST00000493031 276 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 RNU6-830P-201ENST00000516353 107 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 RNU6-107P-201ENST00000516643 102 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 DEFB131E-201ENST00000532329 154 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 MIR4286-201ENST00000580651 93 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.75□□□□□ -1.65
GFRA3O60609 AC022726.1-201ENST00000587475 207 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 uc_338.7-201ENST00000621834 124 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA3O60609 AL133383.2-201ENST00000622958 2336 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.75□□□□□ -1.65
GFRA3O60609 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
GFRA3O60609 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA3O60609 SALL4P2-201ENST00000423288 2910 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.75□□□□□ -1.65
GFRA3O60609 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA3O60609 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
GFRA3O60609 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
GFRA3O60609 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
GFRA3O60609 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA3O60609 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA3O60609 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.74□□□□□ -1.65
GFRA3O60609 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.74□□□□□ -1.65
GFRA3O60609 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA3O60609 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
GFRA3O60609 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA3O60609 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA3O60609 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
GFRA3O60609 MIR372-201ENST00000362225 67 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 RNA5SP453-201ENST00000362503 119 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 Y_RNA.634-201ENST00000364811 113 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 RN7SKP153-201ENST00000365026 316 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 SNORD116-22-201ENST00000384430 92 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 RNU6-882P-201ENST00000391025 103 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA3O60609 RNU4-37P-201ENST00000410214 84 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 RNA5SP56-201ENST00000410277 118 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 RNA5SP127-201ENST00000411051 133 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 RNU6-1245P-201ENST00000411130 106 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 RNA5SP31-201ENST00000411144 127 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 AC011998.1-201ENST00000433403 117 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 HMGB1P37-201ENST00000439613 609 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 RPL23AP93-201ENST00000440847 484 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 AC016632.1-201ENST00000503994 196 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 AC093815.1-201ENST00000508637 280 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.74□□□□□ -1.65
GFRA3O60609 RNU6-113P-201ENST00000516653 101 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 SCARNA20.4-201ENST00000516969 131 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 SNORA70.24-201ENST00000517233 118 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.74□□□□□ -1.65
GFRA3O60609 AC083837.1-201ENST00000565297 2994 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 MIR3200-201ENST00000580767 85 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.74□□□□□ -1.65
GFRA3O60609 AC007179.3-201ENST00000604976 235 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.74□□□□□ -1.65
GFRA3O60609 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA3O60609 AL138721.1-201ENST00000616756 179 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 MIR3653-201ENST00000625572 110 ntBASIC4.74□□□□□ -1.65
GFRA3O60609 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA3O60609 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA3O60609 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA3O60609 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA3O60609 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
GFRA3O60609 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
GFRA3O60609 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA3O60609 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA3O60609 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
GFRA3O60609 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA3O60609 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA3O60609 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA3O60609 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA3O60609 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA3O60609 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
GFRA3O60609 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA3O60609 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA3O60609 Y_RNA.344-201ENST00000365381 112 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 DYNLT3P1-201ENST00000378574 347 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 SNORA2.3-201ENST00000383920 135 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 MT-TI-201ENST00000387365 69 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 RNU6-644P-201ENST00000391155 98 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 BX276092.6-201ENST00000430476 250 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 ANP32BP2-201ENST00000454525 545 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 BX276092.8-201ENST00000455722 250 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 AL132838.2-201ENST00000492041 314 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.73□□□□□ -1.65
GFRA3O60609 AC114801.3-201ENST00000510231 177 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 PARP4P3-201ENST00000510265 317 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 AC107016.1-201ENST00000550463 337 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.73□□□□□ -1.65
GFRA3O60609 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.73□□□□□ -1.65
GFRA3O60609 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA3O60609 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms