Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 RNA5SP49-201ENST00000516450 115 ntBASIC6.28□□□□□ -1.4
VGFO15240 RNU6-659P-201ENST00000516454 104 ntBASIC6.28□□□□□ -1.4
VGFO15240 AL078604.3-201ENST00000615580 211 ntBASIC6.28□□□□□ -1.4
VGFO15240 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VGFO15240 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VGFO15240 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
VGFO15240 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
VGFO15240 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
VGFO15240 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VGFO15240 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VGFO15240 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VGFO15240 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.27□□□□□ -1.41
VGFO15240 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
VGFO15240 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
VGFO15240 snoU2_19.4-201ENST00000364329 80 ntBASIC6.27□□□□□ -1.41
VGFO15240 Y_RNA.293-201ENST00000364908 93 ntBASIC6.27□□□□□ -1.41
VGFO15240 RNU1-100P-201ENST00000365255 165 ntBASIC6.27□□□□□ -1.41
VGFO15240 SNORA8.3-201ENST00000384679 139 ntBASIC6.27□□□□□ -1.41
VGFO15240 MIR325-201ENST00000385260 98 ntBASIC6.27□□□□□ -1.41
VGFO15240 AL160275.2-201ENST00000412010 394 ntBASIC6.27□□□□□ -1.41
VGFO15240 AC125238.1-201ENST00000448842 249 ntBASIC6.27□□□□□ -1.41
VGFO15240 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC6.27□□□□□ -1.41
VGFO15240 snoU13.24-201ENST00000458998 104 ntBASIC6.27□□□□□ -1.41
VGFO15240 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
VGFO15240 AC109810.1-201ENST00000534066 224 ntBASIC6.27□□□□□ -1.41
VGFO15240 AC112484.5-201ENST00000624189 228 ntBASIC6.27□□□□□ -1.41
VGFO15240 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VGFO15240 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VGFO15240 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VGFO15240 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VGFO15240 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
VGFO15240 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
VGFO15240 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VGFO15240 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.26□□□□□ -1.41
VGFO15240 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VGFO15240 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
VGFO15240 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VGFO15240 RNU6-1064P-201ENST00000410626 104 ntBASIC6.26□□□□□ -1.41
VGFO15240 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC6.26□□□□□ -1.41
VGFO15240 AC006461.1-201ENST00000412637 326 ntBASIC6.26□□□□□ -1.41
VGFO15240 AL356095.1-201ENST00000417217 199 ntBASIC6.26□□□□□ -1.41
VGFO15240 RPL37P4-201ENST00000448908 268 ntBASIC6.26□□□□□ -1.41
VGFO15240 SNORA31.8-201ENST00000516327 108 ntBASIC6.26□□□□□ -1.41
VGFO15240 AL021997.2-201ENST00000615674 271 ntBASIC6.26□□□□□ -1.41
VGFO15240 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC6.26□□□□□ -1.41
VGFO15240 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.26□□□□□ -1.41
VGFO15240 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.26□□□□□ -1.41
VGFO15240 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
VGFO15240 AC107068.1-201ENST00000563286 4218 ntBASIC6.25□□□□□ -1.41
VGFO15240 ASNSP1-201ENST00000518311 1939 ntBASIC6.25□□□□□ -1.41
VGFO15240 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VGFO15240 MIR372-201ENST00000362225 67 ntBASIC6.25□□□□□ -1.41
VGFO15240 RNU6-1255P-201ENST00000363434 112 ntBASIC6.25□□□□□ -1.41
VGFO15240 RNU4-10P-201ENST00000364383 140 ntBASIC6.25□□□□□ -1.41
VGFO15240 RNU6-1181P-201ENST00000384191 106 ntBASIC6.25□□□□□ -1.41
VGFO15240 RNY4P18-201ENST00000391107 89 ntBASIC6.25□□□□□ -1.41
VGFO15240 AC096649.2-201ENST00000416186 393 ntBASIC6.25□□□□□ -1.41
VGFO15240 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.25□□□□□ -1.41
VGFO15240 RNA5SP103-201ENST00000459503 118 ntBASIC6.25□□□□□ -1.41
VGFO15240 HMGB1P22-201ENST00000505315 124 ntBASIC6.25□□□□□ -1.41
VGFO15240 SNRPGP15-201ENST00000600149 222 ntBASIC6.25□□□□□ -1.41
VGFO15240 MIR6867-201ENST00000610636 67 ntBASIC6.25□□□□□ -1.41
VGFO15240 FAM27D1-201ENST00000612308 341 ntBASIC6.25□□□□□ -1.41
VGFO15240 TEX41-243ENST00000614173 190 ntTSL 5 BASIC6.25□□□□□ -1.41
VGFO15240 AC013791.1-201ENST00000616619 62 ntBASIC6.25□□□□□ -1.41
VGFO15240 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
VGFO15240 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
VGFO15240 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
VGFO15240 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
VGFO15240 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VGFO15240 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
VGFO15240 RNU6-727P-201ENST00000363592 107 ntBASIC6.24□□□□□ -1.41
VGFO15240 RNU6-245P-201ENST00000384020 107 ntBASIC6.24□□□□□ -1.41
VGFO15240 Y_RNA.563-201ENST00000384707 108 ntBASIC6.24□□□□□ -1.41
VGFO15240 MIR626-201ENST00000385032 94 ntBASIC6.24□□□□□ -1.41
VGFO15240 U3.40-201ENST00000408706 208 ntBASIC6.24□□□□□ -1.41
VGFO15240 RPL26P27-201ENST00000414397 437 ntBASIC6.24□□□□□ -1.41
VGFO15240 BPY2DP-201ENST00000422208 265 ntBASIC6.24□□□□□ -1.41
VGFO15240 HMGN2P30-201ENST00000423237 256 ntBASIC6.24□□□□□ -1.41
VGFO15240 AC092047.1-201ENST00000424997 240 ntBASIC6.24□□□□□ -1.41
VGFO15240 AL157831.1-201ENST00000426134 473 ntBASIC6.24□□□□□ -1.41
VGFO15240 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.24□□□□□ -1.41
VGFO15240 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.24□□□□□ -1.41
VGFO15240 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
VGFO15240 RAC1P5-201ENST00000512182 576 ntBASIC6.24□□□□□ -1.41
VGFO15240 RNU6-436P-201ENST00000516171 114 ntBASIC6.24□□□□□ -1.41
VGFO15240 RNU6-1007P-201ENST00000516586 107 ntBASIC6.24□□□□□ -1.41
VGFO15240 AC024614.2-201ENST00000577584 372 ntBASIC6.24□□□□□ -1.41
VGFO15240 AC006130.2-201ENST00000586202 326 ntBASIC6.24□□□□□ -1.41
VGFO15240 AC005255.1-201ENST00000593748 216 ntBASIC6.24□□□□□ -1.41
VGFO15240 AL670379.2-201ENST00000604983 252 ntBASIC6.24□□□□□ -1.41
VGFO15240 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC6.24□□□□□ -1.41
VGFO15240 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VGFO15240 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VGFO15240 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
VGFO15240 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VGFO15240 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
VGFO15240 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
VGFO15240 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
VGFO15240 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms