Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL022345.2-201ENST00000606307 135 ntBASIC0.45□□□□□ -2.34
CHD1O14646 AC079416.3-201ENST00000624479 549 ntBASIC0.45□□□□□ -2.34
CHD1O14646 SNORD114-15-201ENST00000364687 72 ntBASIC0.44□□□□□ -2.34
CHD1O14646 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.44□□□□□ -2.34
CHD1O14646 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.44□□□□□ -2.34
CHD1O14646 CYCSP27-201ENST00000527643 293 ntBASIC0.44□□□□□ -2.34
CHD1O14646 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.44□□□□□ -2.34
CHD1O14646 AC012414.6-201ENST00000568241 401 ntBASIC0.44□□□□□ -2.34
CHD1O14646 MTCO2P2-201ENST00000591258 225 ntBASIC0.44□□□□□ -2.34
CHD1O14646 AC112220.3-201ENST00000605502 502 ntBASIC0.44□□□□□ -2.34
CHD1O14646 AC011939.3-201ENST00000613686 466 ntBASIC0.44□□□□□ -2.34
CHD1O14646 AC006001.4-201ENST00000622243 395 ntBASIC0.44□□□□□ -2.34
CHD1O14646 MTND4P16-201ENST00000466108 1367 ntBASIC0.44□□□□□ -2.34
CHD1O14646 RNU6-30P-201ENST00000384561 107 ntBASIC0.44□□□□□ -2.34
CHD1O14646 AC119751.3-201ENST00000399720 670 ntBASIC0.44□□□□□ -2.34
CHD1O14646 MIR1262-201ENST00000408276 93 ntBASIC0.44□□□□□ -2.34
CHD1O14646 AC027119.1-201ENST00000440877 241 ntBASIC0.44□□□□□ -2.34
CHD1O14646 AL049874.1-201ENST00000489560 388 ntBASIC0.44□□□□□ -2.34
CHD1O14646 AL160314.1-201ENST00000490836 438 ntBASIC0.44□□□□□ -2.34
CHD1O14646 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.44□□□□□ -2.34
CHD1O14646 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.44□□□□□ -2.34
CHD1O14646 RNU5B-3P-201ENST00000516601 115 ntBASIC0.44□□□□□ -2.34
CHD1O14646 ROCK1P1-201ENST00000573767 549 ntBASIC0.44□□□□□ -2.34
CHD1O14646 BNIP3P16-201ENST00000589779 534 ntBASIC0.44□□□□□ -2.34
CHD1O14646 MZT1P2-201ENST00000604387 248 ntBASIC0.44□□□□□ -2.34
CHD1O14646 AC004492.1-201ENST00000607036 742 ntBASIC0.44□□□□□ -2.34
CHD1O14646 uc_338.17-201ENST00000619633 179 ntBASIC0.44□□□□□ -2.34
CHD1O14646 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.43□□□□□ -2.34
CHD1O14646 CCNG1P1-201ENST00000406783 885 ntBASIC0.43□□□□□ -2.34
CHD1O14646 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.43□□□□□ -2.34
CHD1O14646 MEMO1P3-201ENST00000459811 302 ntBASIC0.43□□□□□ -2.34
CHD1O14646 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.43□□□□□ -2.34
CHD1O14646 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.43□□□□□ -2.34
CHD1O14646 AF129408.1-201ENST00000608767 431 ntBASIC0.43□□□□□ -2.34
CHD1O14646 AL021879.1-201ENST00000611756 288 ntBASIC0.43□□□□□ -2.34
CHD1O14646 MIR8063-201ENST00000621930 81 ntBASIC0.43□□□□□ -2.34
CHD1O14646 AL590396.2-201ENST00000636511 1041 ntBASIC0.43□□□□□ -2.34
CHD1O14646 RNU6-778P-201ENST00000363269 103 ntBASIC0.42□□□□□ -2.34
CHD1O14646 Y_RNA.255-201ENST00000364581 97 ntBASIC0.42□□□□□ -2.34
CHD1O14646 MIR421-201ENST00000365696 85 ntBASIC0.42□□□□□ -2.34
CHD1O14646 MIR525-201ENST00000384978 85 ntBASIC0.42□□□□□ -2.34
CHD1O14646 RPL22P22-201ENST00000395439 379 ntBASIC0.42□□□□□ -2.34
CHD1O14646 AL109755.1-201ENST00000401791 649 ntBASIC0.42□□□□□ -2.34
CHD1O14646 MTCYBP38-201ENST00000417160 1123 ntBASIC0.42□□□□□ -2.34
CHD1O14646 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.42□□□□□ -2.34
CHD1O14646 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.42□□□□□ -2.34
CHD1O14646 PTP4A1P4-201ENST00000512479 322 ntBASIC0.42□□□□□ -2.34
CHD1O14646 RNU6-758P-201ENST00000516292 89 ntBASIC0.42□□□□□ -2.34
CHD1O14646 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.42□□□□□ -2.34
CHD1O14646 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.42□□□□□ -2.34
CHD1O14646 AC239868.4-201ENST00000608318 671 ntBASIC0.42□□□□□ -2.34
CHD1O14646 Y_RNA.170-201ENST00000363746 110 ntBASIC0.41□□□□□ -2.34
CHD1O14646 EIF1P1-201ENST00000421436 341 ntBASIC0.41□□□□□ -2.34
CHD1O14646 AC139712.2-201ENST00000424302 339 ntBASIC0.41□□□□□ -2.34
CHD1O14646 RPS15AP9-201ENST00000439856 381 ntBASIC0.41□□□□□ -2.34
CHD1O14646 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.41□□□□□ -2.34
CHD1O14646 COPS8P3-201ENST00000526024 482 ntBASIC0.41□□□□□ -2.34
CHD1O14646 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.41□□□□□ -2.34
CHD1O14646 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.41□□□□□ -2.34
CHD1O14646 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.41□□□□□ -2.34
CHD1O14646 AC009033.1-201ENST00000624279 431 ntBASIC0.41□□□□□ -2.34
CHD1O14646 AL138713.1-201ENST00000624026 2130 ntBASIC0.41□□□□□ -2.34
CHD1O14646 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.41□□□□□ -2.34
CHD1O14646 AC007919.1-201ENST00000429380 217 ntBASIC0.41□□□□□ -2.34
CHD1O14646 SNRPEP9-201ENST00000436794 238 ntBASIC0.41□□□□□ -2.34
CHD1O14646 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.41□□□□□ -2.34
CHD1O14646 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.41□□□□□ -2.34
CHD1O14646 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.41□□□□□ -2.34
CHD1O14646 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CHD1O14646 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CHD1O14646 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.41□□□□□ -2.34
CHD1O14646 MIR4305-201ENST00000583252 102 ntBASIC0.41□□□□□ -2.34
CHD1O14646 AC091152.3-201ENST00000604227 325 ntBASIC0.41□□□□□ -2.34
CHD1O14646 RNU2-48P-201ENST00000410694 191 ntBASIC0.4□□□□□ -2.35
CHD1O14646 RPL31P54-201ENST00000429803 370 ntBASIC0.4□□□□□ -2.35
CHD1O14646 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.4□□□□□ -2.35
CHD1O14646 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.4□□□□□ -2.35
CHD1O14646 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.4□□□□□ -2.35
CHD1O14646 CYP3A52P-201ENST00000563326 91 ntBASIC0.4□□□□□ -2.35
CHD1O14646 BX284668.6-201ENST00000606899 438 ntBASIC0.4□□□□□ -2.35
CHD1O14646 AC119674.1-220ENST00000641502 1048 ntBASIC0.4□□□□□ -2.35
CHD1O14646 SNORD14D-201ENST00000384390 87 ntBASIC0.39□□□□□ -2.35
CHD1O14646 RNU6-77P-201ENST00000410554 91 ntBASIC0.39□□□□□ -2.35
CHD1O14646 CCDC58P2-201ENST00000417131 366 ntBASIC0.39□□□□□ -2.35
CHD1O14646 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.39□□□□□ -2.35
CHD1O14646 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.39□□□□□ -2.35
CHD1O14646 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.39□□□□□ -2.35
CHD1O14646 NRON-201ENST00000517270 370 ntBASIC0.39□□□□□ -2.35
CHD1O14646 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.39□□□□□ -2.35
CHD1O14646 AC069304.2-201ENST00000605154 435 ntBASIC0.39□□□□□ -2.35
CHD1O14646 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.39□□□□□ -2.35
CHD1O14646 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.39□□□□□ -2.35
CHD1O14646 AL031577.2-201ENST00000404133 280 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AL161935.2-201ENST00000414627 60 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.38□□□□□ -2.35
CHD1O14646 PSMA6P3-201ENST00000428242 164 ntBASIC0.38□□□□□ -2.35
CHD1O14646 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.38□□□□□ -2.35
CHD1O14646 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.38□□□□□ -2.35
CHD1O14646 RNU6-889P-201ENST00000517189 103 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms