Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 SNORA67.1-201ENST00000364749 141 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-715P-201ENST00000365204 103 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-996P-201ENST00000365438 107 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 MTCO3P40-201ENST00000392516 676 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 CIR1P3-201ENST00000405137 479 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU2-3P-201ENST00000410144 191 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU2-29P-201ENST00000410423 189 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU4-46P-201ENST00000410818 138 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 CYCSP33-201ENST00000414485 327 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 MTCYBP8-201ENST00000422855 651 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AC004383.1-201ENST00000438135 289 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AC073415.1-201ENST00000449240 153 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 FDX1P2-201ENST00000450769 375 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 snoU13.26-201ENST00000459452 105 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AC104136.1-201ENST00000512969 394 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 Y_RNA.655-201ENST00000515919 96 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 SNORA31.6-201ENST00000516241 130 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 SCARNA11.3-201ENST00000517276 130 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AC026464.5-201ENST00000562497 722 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 MIR5692A1-201ENST00000580523 69 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 BNIP3P30-201ENST00000601184 574 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 HULC.1-201ENST00000612720 240 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 U6.42-201ENST00000618440 107 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 AC139792.3-201ENST00000623525 224 ntBASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.33□□□□□ -2.04
NEDD8-MDP1E9PL57 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-552P-201ENST00000362869 119 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-45P-201ENST00000384471 107 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-1127P-201ENST00000384580 107 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-607P-201ENST00000411283 108 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 MTND1P1-201ENST00000445453 368 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU7-63P-201ENST00000459054 62 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AC011005.2-201ENST00000487324 359 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AC019235.1-201ENST00000503847 207 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU5F-8P-201ENST00000515941 111 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 SNORA40.12-201ENST00000516329 111 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-720P-201ENST00000516363 108 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 IGKV3-31-201ENST00000523109 329 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AP001893.2-201ENST00000526949 202 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AC245505.1-201ENST00000556398 224 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 MYL12BP1-201ENST00000569826 507 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 EIF1P4-201ENST00000572664 335 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AC004223.2-201ENST00000590309 544 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AC012507.3-201ENST00000603556 477 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AC092954.2-201ENST00000609103 430 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 RMST_4.1-201ENST00000616886 107 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AL354950.2-201ENST00000617939 290 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AC073534.2-201ENST00000620377 381 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 AL359880.1-201ENST00000621879 266 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 MIR6766-201ENST00000622641 72 ntBASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
NEDD8-MDP1E9PL57 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-942P-201ENST00000363002 107 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 U8.8-201ENST00000365399 135 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-517P-201ENST00000384362 110 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 BTF3P15-201ENST00000455606 336 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU7-180P-201ENST00000459240 63 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 snoU109.2-201ENST00000459316 135 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 AL163973.1-201ENST00000484753 577 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-1178P-201ENST00000516674 107 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 SNRPGP18-201ENST00000553000 214 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 LRRC37A5P-203ENST00000580181 585 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 MIR7515-201ENST00000637837 67 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 AL354685.2-201ENST00000448218 1447 ntBASIC2.31□□□□□ -2.04
NEDD8-MDP1E9PL57 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 Y_RNA.255-201ENST00000364581 97 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-1280P-201ENST00000365211 107 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-72P-201ENST00000384285 79 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 MIR10A-201ENST00000385043 110 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms