Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 RLIMP1-201ENST00000339626 1680 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AL391987.6-201ENST00000305671 199 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 RNU1-35P-201ENST00000362782 153 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 RNU6-827P-201ENST00000365553 106 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 RNU6-217P-201ENST00000384164 104 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 MIR325-201ENST00000385260 98 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 HMGN2P8-201ENST00000391458 268 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AL691449.1-201ENST00000426570 421 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 SDAD1P3-201ENST00000427380 333 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 TOMM20P4-201ENST00000427861 435 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AC007919.1-201ENST00000429380 217 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 MYL8P-204ENST00000431574 518 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AL513124.1-201ENST00000450410 614 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 PRELID3BP1-201ENST00000457142 540 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 KC877373.1-201ENST00000479066 408 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AC074250.1-201ENST00000511117 192 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AC067942.3-201ENST00000512025 362 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 RNA5SP143-201ENST00000516936 115 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 Y_RNA.713-201ENST00000517013 96 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AL590705.4-201ENST00000532209 134 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AC073410.2-201ENST00000603240 332 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AL161798.1-201ENST00000604630 131 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AC006077.1-201ENST00000604746 343 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 FTX_2.1-201ENST00000618816 94 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 MIR492-201ENST00000638676 116 ntBASIC3.09□□□□□ -1.91
CGB1A6NKQ9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.09□□□□□ -1.91
CGB1A6NKQ9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.09□□□□□ -1.92
CGB1A6NKQ9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CGB1A6NKQ9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.09□□□□□ -1.92
CGB1A6NKQ9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CGB1A6NKQ9 AC093908.1-201ENST00000623125 8092 ntBASIC3.09□□□□□ -1.92
CGB1A6NKQ9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.92
CGB1A6NKQ9 AC006504.1-201ENST00000562493 3666 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 FAM35DP-201ENST00000323387 2712 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AL359693.1-201ENST00000614959 2407 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 Y_RNA.29-201ENST00000362570 113 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 Y_RNA.180-201ENST00000363867 113 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 RNU6-280P-201ENST00000364145 104 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 SNORA14A-201ENST00000364773 135 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 RNU6-384P-201ENST00000364900 104 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 Y_RNA.352-201ENST00000365439 102 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 Y_RNA.462-201ENST00000384268 102 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 Y_RNA.539-201ENST00000384635 107 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 MIR199A2-201ENST00000385289 110 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 RNA5SP494-201ENST00000410653 129 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AL139109.1-201ENST00000455491 297 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AC092798.1-201ENST00000458542 409 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 RN7SKP210-201ENST00000459176 261 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AL049830.2-201ENST00000480072 201 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AC098869.1-201ENST00000481627 292 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 SNORA31.9-201ENST00000516429 84 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AC006557.5-201ENST00000603126 811 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AC136601.2-201ENST00000604356 474 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AL591034.3-201ENST00000605511 685 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 AC009318.2-201ENST00000610917 651 ntBASIC3.08□□□□□ -1.92
CGB1A6NKQ9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.08□□□□□ -1.92
CGB1A6NKQ9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.07□□□□□ -1.92
CGB1A6NKQ9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CGB1A6NKQ9 NCAPGP1-201ENST00000505112 1814 ntBASIC3.07□□□□□ -1.92
CGB1A6NKQ9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CGB1A6NKQ9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CGB1A6NKQ9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.07□□□□□ -1.92
CGB1A6NKQ9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.07□□□□□ -1.92
CGB1A6NKQ9 Y_RNA.237-201ENST00000364439 102 ntBASIC3.07□□□□□ -1.92
CGB1A6NKQ9 Y_RNA.245-201ENST00000364493 95 ntBASIC3.07□□□□□ -1.92
CGB1A6NKQ9 RNU6-708P-201ENST00000384217 107 ntBASIC3.07□□□□□ -1.92
CGB1A6NKQ9 Y_RNA.458-201ENST00000384240 102 ntBASIC3.07□□□□□ -1.92
CGB1A6NKQ9 HLFP1-201ENST00000402375 499 ntBASIC3.07□□□□□ -1.92
CGB1A6NKQ9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.07□□□□□ -1.92
CGB1A6NKQ9 RPL21P65-201ENST00000406094 466 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms