Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL049830.2-201ENST00000480072 201 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 MTCYBP40-201ENST00000509390 1135 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 SNORA43.2-201ENST00000516652 128 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 SNORD59.2-201ENST00000516873 68 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 AC006199.1-201ENST00000548728 219 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 AC004852.3-201ENST00000614131 326 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 XIST_intron.1-201ENST00000619444 68 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 AC098657.3-201ENST00000620434 263 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 AC091953.5-201ENST00000622919 233 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 AC007256.1-201ENST00000392253 2765 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TCRBV7S3A2A0A539 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 RNA5SP374-201ENST00000362939 125 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 RNU4-76P-201ENST00000364509 141 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 MIR591-201ENST00000385290 95 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 RPS29P13-201ENST00000402041 169 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-293P-201ENST00000411259 106 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 HIGD1AP11-201ENST00000438361 280 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-1037P-201ENST00000459571 107 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 RNA5SP76-201ENST00000516277 87 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-711P-201ENST00000517255 106 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AC009812.2-201ENST00000517657 457 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AC022634.1-201ENST00000520765 532 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AC104576.1-201ENST00000524225 88 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 GLYCAM1-201ENST00000546596 285 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 CPDP1-201ENST00000579660 283 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 VN1R107P-201ENST00000601784 209 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AL160281.1-201ENST00000605307 311 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 YPEL5P2-201ENST00000605553 359 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 AC138627.2-201ENST00000624202 601 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 MIR3199-2-201ENST00000636243 86 ntBASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TCRBV7S3A2A0A539 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 SNORA71.1-201ENST00000364523 117 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-1106P-201ENST00000390845 107 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 U3.19-201ENST00000390893 196 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AL030996.1-201ENST00000411430 235 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 RPS20P15-201ENST00000412792 311 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 ARF4P2-201ENST00000430209 526 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 RPS15AP5-201ENST00000436276 388 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 NIPA2P5-201ENST00000452282 464 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AL031183.1-201ENST00000457667 207 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 RNU7-187P-201ENST00000458985 68 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 Y_RNA.632-201ENST00000459189 102 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AC116655.1-201ENST00000508324 901 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AC116337.1-201ENST00000509680 687 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AC010265.1-201ENST00000513509 211 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-377P-201ENST00000515965 102 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 SNORD19.2-201ENST00000516978 73 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 RN7SKP272-201ENST00000516988 232 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 CR383656.8-201ENST00000549046 145 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 TRAV32-201ENST00000553993 340 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AL163153.1-201ENST00000554223 283 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AC005046.1-201ENST00000608515 625 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AC090115.4-201ENST00000609970 188 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AC107871.2-201ENST00000612894 502 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 AL161423.1-201ENST00000613700 262 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TCRBV7S3A2A0A539 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 ADAM3A-203ENST00000461344 2157 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 Y_RNA.58-201ENST00000362807 102 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 Y_RNA.67-201ENST00000362870 100 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms