Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AC022513.1-201ENST00000624512 117 ntBASIC0.76□□□□□ -2.29
TRAV12-1A0A0B4J245 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV12-1A0A0B4J245 AC245060.5-201ENST00000610778 3293 ntBASIC0.76□□□□□ -2.29
TRAV12-1A0A0B4J245 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 RNU6-462P-201ENST00000362659 105 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 SNORD1A-201ENST00000364968 72 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 SNORD116-20-201ENST00000384529 92 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 Y_RNA.623-201ENST00000411128 95 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 RNA5SP508-201ENST00000411327 119 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AL669831.1-202ENST00000428504 417 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 CBX3P6-201ENST00000430257 527 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 RPS15AP10-201ENST00000432472 382 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC079448.1-201ENST00000449377 373 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC130509.1-201ENST00000464158 433 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC009646.1-201ENST00000510455 318 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AL161670.1-201ENST00000554348 137 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC012414.6-201ENST00000568241 401 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC005786.1-201ENST00000588553 154 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC025754.2-201ENST00000606491 432 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 MIR15A-201ENST00000607334 83 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AL355816.2-201ENST00000610049 647 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC126544.2-201ENST00000625174 749 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 AC068205.3-201ENST00000636385 468 ntBASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV12-1A0A0B4J245 ICE2P2-201ENST00000483823 2787 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 SNORD3E-201ENST00000362899 217 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 RNA5SP387-201ENST00000364226 106 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 RNA5SP190-201ENST00000365222 118 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 MIR618-201ENST00000385287 98 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 RNA5SP390-201ENST00000410191 113 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 AL022238.1-201ENST00000442557 355 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 HMGN1P13-201ENST00000505795 138 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 AC109445.1-201ENST00000512356 383 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 RNA5SP216-201ENST00000516111 123 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 RNU6-295P-201ENST00000516901 104 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 TRAV32-201ENST00000553993 340 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 MIR4672-201ENST00000583126 81 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 AC011494.1-201ENST00000596454 237 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 VN1R82P-201ENST00000601481 356 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 AL078604.3-201ENST00000615580 211 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 AC120349.3-201ENST00000624377 529 ntBASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.74□□□□□ -2.29
TRAV12-1A0A0B4J245 AC092104.1-201ENST00000497346 1441 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 SNORA25.8-201ENST00000364831 128 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 RNU6-296P-201ENST00000384608 107 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 UBE2V1P8-201ENST00000437166 265 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 LARP1BP3-201ENST00000437229 869 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 HMGB3P12-201ENST00000438745 556 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC027119.1-201ENST00000440877 241 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 JTBP1-201ENST00000441314 247 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 RPL30P12-201ENST00000474666 353 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 RPL30P7-201ENST00000479312 323 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 RPL26P26-201ENST00000480251 434 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AL133373.1-201ENST00000497098 94 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC069306.1-201ENST00000507006 843 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC119751.4-201ENST00000507498 357 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 RNU1-92P-201ENST00000517017 135 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC090115.3-201ENST00000553218 849 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC009712.1-201ENST00000564938 316 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 MIR5094-201ENST00000578766 85 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 MIR4435-1-201ENST00000582552 80 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC022022.2-201ENST00000602989 360 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC024940.5-201ENST00000622889 474 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC007792.1-201ENST00000623023 402 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC010149.2-201ENST00000637608 315 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 AC233981.2-201ENST00000611524 1614 ntBASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
TRAV12-1A0A0B4J245 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 RNA5SP327-201ENST00000362494 101 ntBASIC0.72□□□□□ -2.29
TRAV12-1A0A0B4J245 U8.2-201ENST00000363156 134 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms